Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4538 |
Symbol | |
ID | 8728302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5503182 |
End bp | 5503859 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | leucine-rich repeat protein |
Protein accession | YP_003389317 |
Protein GI | 284039387 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTCT TTCAAGACGA CTATGAGTCT CAACCTGAGA CCGTTGAGGA GCGTTTATTT CACATTCGGT CGTGTCTATC CACGAAAATC AACCTGAACA GGCTTAGTCT GGACGGCTTT CCGGAGGAGG TTTTCAACTA TCCGCAGGTT ACACATCTCT ACATAGGTAA CCTTGCCCCA TTGTCGCAGG AATCGGGTAA TTTCCTAATC AACATTATCC GAAAAAGGGC CAGGGAAACG AATGATTCAG TTGCCTATCT GGAAGAAATC GCCGAAATCC GTCGTTGTAT GACCCCGGCA AAAACCATCG GTCATCTGCC CGACCGCATC AGCGAATTAA CTAATCTGGA AGAGCTGTAC CTTGTGGGGC AGCAACTAAC CGAACTCCCG GAATCACTTT GCGAACTACC AAATCTGAAA CGACTTTACG TACACAACAA CAAATTAACA ACGCTGCCTG CCAAATTCAA TCAGCTTAAA TCGCTGGTCT GTCTAAACGT GCGCGATAAC CCCATCAAAA CCTGGCCGGA CGGTTTCTGG GAGATGCCGT TCATCAATCA ATACCAGCGT GACCTGGAAA TCGCCGATCA ACGCGAAACC GAACTCCTTC TCGAAAAGAA CTACAAAGCC GCCAGAACGC TTCGCAGCGA AGCTATCCGT TGGGGCTTGC ACTGGTAA
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Protein sequence | MYFFQDDYES QPETVEERLF HIRSCLSTKI NLNRLSLDGF PEEVFNYPQV THLYIGNLAP LSQESGNFLI NIIRKRARET NDSVAYLEEI AEIRRCMTPA KTIGHLPDRI SELTNLEELY LVGQQLTELP ESLCELPNLK RLYVHNNKLT TLPAKFNQLK SLVCLNVRDN PIKTWPDGFW EMPFINQYQR DLEIADQRET ELLLEKNYKA ARTLRSEAIR WGLHW
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