Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4432 |
Symbol | |
ID | 8728192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5370618 |
End bp | 5371574 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003389212 |
Protein GI | 284039282 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.370103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.663169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTC TTTTTTTAAA AGGTACACGT CTGATGTCTG TACTTTTTCT GGTGCTGACG GTTTTAACAG GGTGCACAAA AAGTGATGAT ACCGTCGCCA CTCCCCAGAC AATCACTGAC CGTATCCTGG AAGACAGTCA ATTTTCGATA CTGCGGGCTG CTGTTACCTA TTCAGAAATG GGCGACTTGC TCAAAGGAGG TAATCTGACA CTTTTCGCGC CCAATGATGC CGCTTTTCAG GTAGCCGGGT ATGGTTCACC AACCGCCATT GCTGCGTTGT CGAAAGAGCA GGTACGGAGT TTATTGTTGT ATCATGTACT GGAGGGACCT GTACCGGCAT CAGCAATTCC GGGTGGACTT AATCCGGTAA CGACGGCCGA TAAAGGTGTC GCTTACATCA ACAAAGCGTC GGATGGCAGG GTTTTTATCA ATAATGCCCA GGTGATTCAG GCCGATATTC AGGTGGCGAA TGGATACATT CATAGTATCG ACCAAGTATT GACCCCATCG GCCGGCAACT TATTGACGGC TATTCGGACT AATCCGAATC TTACCTTGCT CACGGCTGCC GTAAATAGAG TGGCTGCCAG TAATCCAACT CTGTTAGCTA CCTTGAGCAA CAACGCATCG ACCAATCTGG TCACTATATT CGCCCCGAAC GATGCAGCTT TCAGATCGGC GGGTTATACC GATCTGGCGG CTATCAACGC GGCTAATCTG CAAACCCTGA CGAATGTGCT GCTGTATCAT GTGGTATCGG GGGTTACGTT TTCCAACCAG TTTCAAACGG GTACACTGAA TACGTTACTC ACCGGAAACC GACTAATTGT ATTGTCGACG GCGAACCTGC TCACGATAAA GGGAAATAAG AATGCGACAA CGGCTACCGT CAAGCAGGGT AACATACCGG CTAACAGTGG CGTAATTCAT ATTATTGACC AGGTGTTACT CCCATAA
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Protein sequence | MNALFLKGTR LMSVLFLVLT VLTGCTKSDD TVATPQTITD RILEDSQFSI LRAAVTYSEM GDLLKGGNLT LFAPNDAAFQ VAGYGSPTAI AALSKEQVRS LLLYHVLEGP VPASAIPGGL NPVTTADKGV AYINKASDGR VFINNAQVIQ ADIQVANGYI HSIDQVLTPS AGNLLTAIRT NPNLTLLTAA VNRVAASNPT LLATLSNNAS TNLVTIFAPN DAAFRSAGYT DLAAINAANL QTLTNVLLYH VVSGVTFSNQ FQTGTLNTLL TGNRLIVLST ANLLTIKGNK NATTATVKQG NIPANSGVIH IIDQVLLP
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