Gene Slin_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4432 
Symbol 
ID8728192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5370618 
End bp5371574 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003389212 
Protein GI284039282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.370103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.663169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC TTTTTTTAAA AGGTACACGT CTGATGTCTG TACTTTTTCT GGTGCTGACG 
GTTTTAACAG GGTGCACAAA AAGTGATGAT ACCGTCGCCA CTCCCCAGAC AATCACTGAC
CGTATCCTGG AAGACAGTCA ATTTTCGATA CTGCGGGCTG CTGTTACCTA TTCAGAAATG
GGCGACTTGC TCAAAGGAGG TAATCTGACA CTTTTCGCGC CCAATGATGC CGCTTTTCAG
GTAGCCGGGT ATGGTTCACC AACCGCCATT GCTGCGTTGT CGAAAGAGCA GGTACGGAGT
TTATTGTTGT ATCATGTACT GGAGGGACCT GTACCGGCAT CAGCAATTCC GGGTGGACTT
AATCCGGTAA CGACGGCCGA TAAAGGTGTC GCTTACATCA ACAAAGCGTC GGATGGCAGG
GTTTTTATCA ATAATGCCCA GGTGATTCAG GCCGATATTC AGGTGGCGAA TGGATACATT
CATAGTATCG ACCAAGTATT GACCCCATCG GCCGGCAACT TATTGACGGC TATTCGGACT
AATCCGAATC TTACCTTGCT CACGGCTGCC GTAAATAGAG TGGCTGCCAG TAATCCAACT
CTGTTAGCTA CCTTGAGCAA CAACGCATCG ACCAATCTGG TCACTATATT CGCCCCGAAC
GATGCAGCTT TCAGATCGGC GGGTTATACC GATCTGGCGG CTATCAACGC GGCTAATCTG
CAAACCCTGA CGAATGTGCT GCTGTATCAT GTGGTATCGG GGGTTACGTT TTCCAACCAG
TTTCAAACGG GTACACTGAA TACGTTACTC ACCGGAAACC GACTAATTGT ATTGTCGACG
GCGAACCTGC TCACGATAAA GGGAAATAAG AATGCGACAA CGGCTACCGT CAAGCAGGGT
AACATACCGG CTAACAGTGG CGTAATTCAT ATTATTGACC AGGTGTTACT CCCATAA
 
Protein sequence
MNALFLKGTR LMSVLFLVLT VLTGCTKSDD TVATPQTITD RILEDSQFSI LRAAVTYSEM 
GDLLKGGNLT LFAPNDAAFQ VAGYGSPTAI AALSKEQVRS LLLYHVLEGP VPASAIPGGL
NPVTTADKGV AYINKASDGR VFINNAQVIQ ADIQVANGYI HSIDQVLTPS AGNLLTAIRT
NPNLTLLTAA VNRVAASNPT LLATLSNNAS TNLVTIFAPN DAAFRSAGYT DLAAINAANL
QTLTNVLLYH VVSGVTFSNQ FQTGTLNTLL TGNRLIVLST ANLLTIKGNK NATTATVKQG
NIPANSGVIH IIDQVLLP