Gene Slin_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4388 
Symbol 
ID8728148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5322864 
End bp5323985 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389168 
Protein GI284039238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.420065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TTACCCTACT CTGCCTGATA CTGGTTGGTG CTGCCACTGC ACAGGCAAGT 
CATTTGCTGG GTGGTTATAT TCAGGCTACT CCCATTACAG GCTCACCCCT AACCTACCGA
ATTTCAGCCC TGTTGTACAT GGATGAAGTT CGCGGAAAAT CAGCTGCCGA TCAGGCCGAT
GTCCTGGAAA TCTGTTTAGG TGATGGCAGT ACCGTGAAAG CCTTTCGCGC CAGCCGGTTG
TTGATTGAGA ATAAAACAAC GAGCATTAAT AGCTATACGC TCATCCATAC GTACGCGGGA
CCGGGCGTTT ATCCCTTAAC CCTTGTGCTC TCCAACCGAA CGGTTGTTAA GAACATCACA
AACGCCGACG CACAGTTGTT TTCCCTGACT TCGGTCTTGT CGACCAACCT GGTCAATCAG
ACGCCCACAC CGGGTTATCC CGGAAATGGC GTCCACGTTA GCGTTGGTCG CCGGGCAACG
ATTTCACTGG CGGCTACCGA TCCCGAAGGC GATAGTCTGG TGTATGGGCT GTCAAAAGCG
CAGACCAGCG TAACCCAGTC TTCATGTAAT ACGCAGCCAG TTTCTTCTTA CCAGTATCCA
AACGATGTAA CGCGCCGGGG TACTTTCAAG ATCAACAGCC GAACGGGCGA ACTTATCTGG
GATGCCCCTA CTGAGCTGGG GTACTACAGC GTGACCTTAA CCATTAACGA ATACCGACGC
GGTGTTCTGA TCAGCCAGAC AACGCAGGAA ATACCGCTGG TTGTTGAGGA TATTCCCGGC
ACACCGGGCA CAGTCCCTCC GTACGAATCA GCAGCCGATG GACCATCGGC GACGGGCCTG
GTGACGGCCA CAACAGATTA CGAAGATGTA AACGTCCGGC TCGTTACATT TCCAAATCCC
GTTGATGATC GGTTGCAGGT GGTGATCCAG ACGAGCAATC CAACAACCGC CACACTACAG
CTAACGGATA ACAACGGCCG CAAACTTCAC GAGTTAACGT TTCATCGGAT GGCCCGCCAG
CATGAGCAGG TTATCAGCAT GAGCAGCCTG ACGCCGGGCG TTTATGTACT CCGTGCTGAG
ATAGACGGAC GAATACTAAC GCGAAAAGTT GTGAAGCGGT GA
 
Protein sequence
MKIITLLCLI LVGAATAQAS HLLGGYIQAT PITGSPLTYR ISALLYMDEV RGKSAADQAD 
VLEICLGDGS TVKAFRASRL LIENKTTSIN SYTLIHTYAG PGVYPLTLVL SNRTVVKNIT
NADAQLFSLT SVLSTNLVNQ TPTPGYPGNG VHVSVGRRAT ISLAATDPEG DSLVYGLSKA
QTSVTQSSCN TQPVSSYQYP NDVTRRGTFK INSRTGELIW DAPTELGYYS VTLTINEYRR
GVLISQTTQE IPLVVEDIPG TPGTVPPYES AADGPSATGL VTATTDYEDV NVRLVTFPNP
VDDRLQVVIQ TSNPTTATLQ LTDNNGRKLH ELTFHRMARQ HEQVISMSSL TPGVYVLRAE
IDGRILTRKV VKR