Gene Slin_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4278 
Symbol 
ID8728037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5162127 
End bp5163038 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389061 
Protein GI284039131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC CCCTTAATCT TAGCCAGGTA CGTTCGTTTG GAAACGTCGA ATTTCTGGCC 
CGTCAACTGG TCGAAGGCTT TATTACAGGG CTGCACAAAT CACCCTTCCA TGGGTTTTCG
GTCGAGTTTG CGGAACACCG GCTCTACAAT ACCGGCGAAA CAACCCGACA CATCGACTGG
AAAGTGTTTG GGAAGACAGA GAAATTATTT GTCAAGCGCT ACGAAGAGGA AACAAACTTA
CGCTGTCACC TGCTGATCGA TACATCGTCG TCGATGTATT ACCCCGAAGC TACGTATGGG
AAGATGACCT TCAGTGTGAT GGCGGCCGCG TGTCTGGCTT ATATGCTGCA GCGCCAGAAA
GATGCTGTGA GCCTGACCAC CTTCGCGGAT CAGATCGACT TGCAAACGCC TACAAAATCG
ACGCCGTCGC ACGTTCACAA GCTGTTTACG CAACTGGATC TGTTGATGCA GCAGCCTAAA
CCGCTACGAA AAACCTCGGC GGCTGATGTC ATTCATCTGG TAGCCGAAAA GATCAACAAA
CGGTCGCTGG TGGTTATTTT CAGCGATATG TTCGACAACA GCGAAAAAGC CGATGCGCTG
TTTTCGGCCC TACAGCACTT ACGCCATAAC TTACACGAAG TGCTGCTGTT TCACGTAACG
GACAAAAAAA CGGAAGAGGA ATTCGCGTTC GATGAACGCC CCTACGAATT TATCGACCTG
GAAACCGGCG AAAAAGTAAA GCTTCAGCCC GGACAGGTAC GGGAAACGTA TCAGCAGGCG
GTAAAGACGT ATTTCCAGGA ACTAAAAATG CGTTGCGGTC AATACAAAAT CGACTTCATC
GAAGCCGACA TCGCCCAGGG CTTCGACCAG ATTCTGCAAG CCTATCTGGT GAAGCGGACG
AAGATGAGGT AG
 
Protein sequence
MKQPLNLSQV RSFGNVEFLA RQLVEGFITG LHKSPFHGFS VEFAEHRLYN TGETTRHIDW 
KVFGKTEKLF VKRYEEETNL RCHLLIDTSS SMYYPEATYG KMTFSVMAAA CLAYMLQRQK
DAVSLTTFAD QIDLQTPTKS TPSHVHKLFT QLDLLMQQPK PLRKTSAADV IHLVAEKINK
RSLVVIFSDM FDNSEKADAL FSALQHLRHN LHEVLLFHVT DKKTEEEFAF DERPYEFIDL
ETGEKVKLQP GQVRETYQQA VKTYFQELKM RCGQYKIDFI EADIAQGFDQ ILQAYLVKRT
KMR