Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4204 |
Symbol | |
ID | 8727963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5062712 |
End bp | 5063374 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_003388988 |
Protein GI | 284039058 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA ACTTCGACCT CAGCGTTGTT TTAGCGCATA TTGAAACGGC TATCCGGCCA TACCCGAAAG CGGCCATGTT CGATCTGTTC GAGCGGGGTT ACAACACCCT TTTCGAACAG CTGATTTCCT GTATTATCTC CATCCGTACG CTCGACGAAA CGACTATTCC GGTGTCCCTG CGCCTGTTTG AACGCGCCCG CACTCCTGAG CAGCTCCTTA CCCTCGACGT AGCCGCGCTG ACCGAATTAC TCTACGGCAC CACTTACCCC GATCAGAAAG CGTACACCAT GCTGGGCATT GCCGGGCGTA TTGTGAATGA ATTCAACGGC GAGTTACCAG CTGACTACGC AACCCTGACG TCGCTGAAAG GCGTCGGCCC AAAGTGCGCC AATCTGGCGC TGGGCGTTGC AACCGGTCAG GCTGCCATTA GTGTGGATGT GCATGTGCAT CGGGTAGTGA ACCGCTGGGG GTATGTGCAT ACCAAACAAC CCGAACAAAC GCTGAAAGTG CTGGAAACGC AGGTGCCTCA TGAGCAATGG GTCGATATCA ACCGGCTGCT CATGCCTTTC GGGAAGCACA TTTGTACGGG TACCTTGCCG CATTGTTCAA CCTGTCCCGT GTTGCCCTGG TGCGAACAGG TAGGGGTAGA GCGGCATCGG TAA
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Protein sequence | MKPNFDLSVV LAHIETAIRP YPKAAMFDLF ERGYNTLFEQ LISCIISIRT LDETTIPVSL RLFERARTPE QLLTLDVAAL TELLYGTTYP DQKAYTMLGI AGRIVNEFNG ELPADYATLT SLKGVGPKCA NLALGVATGQ AAISVDVHVH RVVNRWGYVH TKQPEQTLKV LETQVPHEQW VDINRLLMPF GKHICTGTLP HCSTCPVLPW CEQVGVERHR
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