| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4019 |
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| Symbol | |
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| ID | 8727777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4829165 |
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| End bp | 4830043 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003388808 |
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| Protein GI | 284038878 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.992917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00536454 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACGCA TCACCCAATA TGACGGCCTC TACGGCGAGG CAAATACCCA ACCCGATGCG
GAGTACCTAT TCTCCGAATT GCTGGAGACG CGCAGTCAAA GCTTCGACTG GGTTATTCAG
CCGCATATCC ATGCCCGGTT GTTTCAGGTT TTTTTTATTG AAACCGGCCA GTTCAACTTT
CAGGAAGCCA GCCGTGAGCG TCAACTCACT GGCCCCTGCC TGTTACTGAT TCCTCCTACG
GCTCTGCATG GTTTCGTGTA CAATGCCGAT GTGAGAGGGC GTATTCTGAC CCTGTCCGAC
GCGCTGATCG ATGCGTTGTT CCCCAGTGGG TCGCCCGTTA CGGCCATGCT GGGCAGTCTG
CAATGCCTCT CAATCGTTCA GGGACCTTAT TCGGCCGAGC GGGTTAGCGA ATTGATCAAA
GCGATTGACG ACGAATTATT CGACGATCAG CCTGAAAAAC GGCTCATGTT ACAGAGTTGT
CTGCAACAGT TTTTTCTGGT TGTTTATCGC CTGTGGCAGG AAAGCGAACA GACCGGATCG
GTAACAAACA ACCTGTCGCT TCAGTATTTT CGAAAGTTTC AGCAGCGCGT GCGGCAGGCA
GGCACGACGC AGACCATTGC CCAGCTGGCC GACGATCTGG CCATTACACC AGTCCACCTG
AACCGGATAT GCCAGGCCGT TTCGGGTAAA TCGGCCAGCC AACTGGTGCA GGCGCATATT
CTCGACGAAG CCCGCAAGTA CCTGACCTAC ACGACGTACT CTATTTCTGA GATTGCCTAT
CTGCTCAACT TCGAGTATCC GAACTATTTT GCCCGATTTT TTCGGAAGAA TGCCGGGCTA
TCGCCCACCG AATTCAGGGA GCGCCAAACC AAGATCTAA
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| Protein sequence | MQRITQYDGL YGEANTQPDA EYLFSELLET RSQSFDWVIQ PHIHARLFQV FFIETGQFNF
QEASRERQLT GPCLLLIPPT ALHGFVYNAD VRGRILTLSD ALIDALFPSG SPVTAMLGSL
QCLSIVQGPY SAERVSELIK AIDDELFDDQ PEKRLMLQSC LQQFFLVVYR LWQESEQTGS
VTNNLSLQYF RKFQQRVRQA GTTQTIAQLA DDLAITPVHL NRICQAVSGK SASQLVQAHI
LDEARKYLTY TTYSISEIAY LLNFEYPNYF ARFFRKNAGL SPTEFRERQT KI
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