Gene Slin_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3899 
Symbol 
ID8727657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4678733 
End bp4679197 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388688 
Protein GI284038758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0897201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCG TTGTTACGGC CCTATTCATC TTGGCCTCCG GTTGTAGTTC ACCTGCCAAA 
GAAAAGCCAG CCACTGCCGA GGAGCTCTCA CAGGTAAACC GCGATTTCGT GAAAGCGTTA
AACGCCAAGG ATGCCGCAGC AGCCGCTAAT TGTTATGCCG AAGATGCCGT AATACTACCT
CCCGGCCAAC CTAATGTAAC GGGTCACGAA GCCATTCAGA AATACTGGCA GGGCTTCCTG
GATGGTGCAG GCTACGTTGA TGGCACCGTC TCGACGATCG CCACGGGCAG CAACGGCGAC
TTAGGTTATG AAATCGGGAC GGCTGACCTG CACCTGAAAG GCCCTGACGG GAAAATTGTG
ACCGAAAAAA TAAAATATAC CATCGTTCTT AAACGCAATG CCGAGGGCAA GTGGCTCCAA
ACCTACGATA TGTGGAATCC GGTTGCTGAA CCTACGGCTA AGTAG
 
Protein sequence
MLAVVTALFI LASGCSSPAK EKPATAEELS QVNRDFVKAL NAKDAAAAAN CYAEDAVILP 
PGQPNVTGHE AIQKYWQGFL DGAGYVDGTV STIATGSNGD LGYEIGTADL HLKGPDGKIV
TEKIKYTIVL KRNAEGKWLQ TYDMWNPVAE PTAK