Gene Slin_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3898 
Symbol 
ID8727656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4678172 
End bp4678666 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388687 
Protein GI284038757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.128161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA ACCAGGTACC ACTGATGTTG GCTGCACTTG CGGCTACGCT TGTATTCACT 
ACCGGCTGCA ACTCGCCCGC CAAAGAAAGT GTCGCGACAG TCGATAACTC CACACTCAAA
AAAGAAATCG AAGCCGCCAA TATTGTGTTC GCGGGCTTCA TCGCCAAAGG CGACTCGGTG
GGCATGGCCA ATTTTTATAC TGAGGACGCG AAACTGATGT TCTCGAACGC ACCAGCCATC
GTGGGCCGCA AAAATATTCA GACGGCTATA CACAACGTCC TCGGTTCGGG AATCGCCAAA
GCTGAGTTTA CTACCATCGA CGTATGGGGA ACCGGCGACT TCGTGTCGGA AGAGGGCCAA
GCTAGCTTGT TCGATAAAGC CGGTACGCAG GTAATCAAGG ACAAGTACAT CCTCCTCTGG
AAAAAGGAAG CGGGTAAATG GAAGCCCTTC CGCGACATAA CCAACTCCGA TTTACCCCCG
TCTGCGGCTA AGTAA
 
Protein sequence
MKTNQVPLML AALAATLVFT TGCNSPAKES VATVDNSTLK KEIEAANIVF AGFIAKGDSV 
GMANFYTEDA KLMFSNAPAI VGRKNIQTAI HNVLGSGIAK AEFTTIDVWG TGDFVSEEGQ
ASLFDKAGTQ VIKDKYILLW KKEAGKWKPF RDITNSDLPP SAAK