Gene Slin_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3411 
Symbol 
ID8727164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4126627 
End bp4127370 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content37% 
IMG OID 
Producttype II restriction-modification enzyme 
Protein accessionYP_003388218 
Protein GI284038288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.270172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTGT CCTCGGCCGA AGCCCGCATT AAAGCCAAGA TTGAAGAAGC TGGAAAGCCA 
CTCAAAGACT GGGACGTGCA AATAAATTAC GGTATTAAAA CCGGATTTAA TGAAGCGTTC
ATCATTGACG GTAAAACCAA AGATGAACTA GTTTTAAAAT GTCCAAAATC TGCTGAAATT
ATACGTCCAG TGTTAAGAGG AAGAGATATT GGACGTTATC AAGCGGTGTT TTCGGATTTA
TGGCTTCTAT TTATTCCTTG GCACTTCCCC TTACAGTATG GATCTGTATT GAATGGAAGT
TCTACATTAG CTGAAGAGAG ATTTCGAAGT GACTATCCCA TTATTTATCA ACATCTACTC
AAATACAAAA AAGAATTATC TCAAAGAAAT CAAGCTGAGA CAGGCATCCG CTACGAATGG
TACGCAATGC AAAGATTTGG AGCTAATTAT GCCGATGATT TTGTTAAACC TAAAATTATA
TGGGGAAATT TGAACATTGA AGCCACCTTT AGTATCGATT ACCAAGGTAG TTATATACTC
GCACCTTGTA ATATGCTTAC GTCTAAAAAT GACGATTTAA ATTATTTACT TGCAATATTA
AACTCGCCAG TCACTACTTA TTTTATGAAG AATCAAGGTT ATAGTCGTGA GGGTGGTTAC
GTAGAGTACA AACGAATTTT ATCGAGCAAC TGCCTATACC TGAAGCGTCA AATGTTCAAA
GAGGTAAAAT TGAGTTGCTT ATAA
 
Protein sequence
MILSSAEARI KAKIEEAGKP LKDWDVQINY GIKTGFNEAF IIDGKTKDEL VLKCPKSAEI 
IRPVLRGRDI GRYQAVFSDL WLLFIPWHFP LQYGSVLNGS STLAEERFRS DYPIIYQHLL
KYKKELSQRN QAETGIRYEW YAMQRFGANY ADDFVKPKII WGNLNIEATF SIDYQGSYIL
APCNMLTSKN DDLNYLLAIL NSPVTTYFMK NQGYSREGGY VEYKRILSSN CLYLKRQMFK
EVKLSCL