Gene Slin_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2973 
Symbol 
ID8726724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3590138 
End bp3590932 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID 
ProductFHA domain containing protein 
Protein accessionYP_003387784 
Protein GI284037854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.247002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCT TACCGATAAG TGAGAATAAA CTCGAACAAT TTATTGACGA GTTAAGTCAC 
CTGCCATCCT ATTCAATAGG CCGGACTGCT GATAATCAGC TTGTTATTTC AGATAGTAAA
ATAAGTGGGC ATCATGCCCG ATTGATTTAT TGTACGCCTT CAAATTTCAT TCTTGAAGAC
CTTCAGAGTA AAAATGGCTC TTATGTTAAC GGCCTGAGAG TTACCCGAAA GGTAGTGGGT
GAGCAGGACC TGATTCGACT TGCCGAAACA GAGATGACCT GTCAGCAACT GGTCGCGTTG
TTGCCTGACA AGGCTGCCCG GCCACTTGCC AAAGCGCAGC CGCAGCCTGT TGTGGCCCCG
GAAGCTCCCC CGTCACCAGC CAAATCAACA GTGGCAGTAC AGCCGCTCGA TTTTACTTCT
TCTTTTGCCG CGTTAAAACT GGTTTATGAG CAATACCCCC GGCTACGTCG GGATTGCCGC
AACCGGGAGA AAATGATTCG AACGGGTAGC GTTATACTTT CCTCCGTTGT GGGCATAACT
GCCGTGCTGT CTACTGGCGG AGGTGCGTTG CCCTTTATTC AGATTATGTC GGGGGCAGGG
CTGAGTGTAC TCATCCCTAC GCTAAGCTCT ACGCTGCTGT CGACCGACGA GAAACTCGAA
ATAATCGATA GAGAATACCG TGACGTGTAT AGGTGTCCGA ATCCGGCCTG CCGCGATCCA
TTTGGTACAC GTGATTGGGA CCTTCTGGCA GCACAAAAGA CTTGCCGCCG TTGTCAGGCA
ATCTGGGTCA GCTAA
 
Protein sequence
MPPLPISENK LEQFIDELSH LPSYSIGRTA DNQLVISDSK ISGHHARLIY CTPSNFILED 
LQSKNGSYVN GLRVTRKVVG EQDLIRLAET EMTCQQLVAL LPDKAARPLA KAQPQPVVAP
EAPPSPAKST VAVQPLDFTS SFAALKLVYE QYPRLRRDCR NREKMIRTGS VILSSVVGIT
AVLSTGGGAL PFIQIMSGAG LSVLIPTLSS TLLSTDEKLE IIDREYRDVY RCPNPACRDP
FGTRDWDLLA AQKTCRRCQA IWVS