| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2557 |
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| Symbol | |
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| ID | 8726302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3089607 |
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| End bp | 3090677 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003387374 |
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| Protein GI | 284037444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000027885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.211023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAA ACTTTATACG CTCCCTTGCG TTTTGCCTGT CGATTCTGAC GCTGTCGGCC
TGTCAGTCTT CATCTGATAA AAAACAAAAT CAGACGGCGG CAGTCACCGA AACACCCGTC
GCTATCCCGG TGGTTGTTAG CCGTGTTCAG GATACAACAG AAGGAGGTCA ACTGATTCTA
AGCGGCTCAA CCGAATCGGA AACCACCGTA AATTTAGGGT TTATGGTGGC CGGAAAGCTA
AATCGGGTCA CAATTCAGGA AGGGCAGACC GTTCATGCAG GTCAGTTGAT TGCCTCCATC
GAACCAACCG ACTACCAATT GGGCGTTACC ATTGCCAACG CTAATGTTGC GAGGGTGCAG
GACGAATACA ACCGGCTGAC TATTCTGAAA GAACGGGGCA GTGTGACGCC CAGCGATTAT
GAAAAGGTCG TAACGGGGCT CGACGAGGTA AAAGCCCGTC AGCAACTGGC GGCCAAAAAC
CTCCGCGAAA CCAAACTCTA CTCCCCTATT TCCGGCATTG TGGCCCGCAA AGGAGCCAAT
CCGGGTGAGA TCATCCCGCA GGGTCAACCC CTGTTTCAAA TCGCCGACAT TCAGCCCATC
AAAGTACGGG TATCGGTACC TGAATCGGAA GTCGGGCAGC TTCGGCTGGG GCAGTCGGCG
CAGGTTACGA TTCCGGCCAT AAATGGCACC TATACCGGGA AAATTTCGCT TATCGGTGCC
GTTGCAGACC CCGCTTCCCG CGCCTATTCG GTCAAGATCG ACCTTCCTAA TCCGAAACTT
CAGATTCGCC CCGGCATGAT TGCCGACGCC CGGATACCAT CAGCCCGGCA ATCAAAAGCA
CTGAGCCTGC CCGGCAATGC CATCCTGCGC GACGATGATC AGTCAACCTA CGTATTTGTA
GCCGACTCCC AGAAGAAACA GGCCTTTAAA CGAAAAGTAA CCATCGGTAA GATTTTCGCC
AGTAACGTCG AAATCACATC GGGCCTTACC CCCAGCGACC TCGTCGTAAC CGGAGGGCAG
CAGAAACTAC AGGAAGGCGC TTCGATTCAA TTTAACCAAC CCGCTCAATG A
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| Protein sequence | MTTNFIRSLA FCLSILTLSA CQSSSDKKQN QTAAVTETPV AIPVVVSRVQ DTTEGGQLIL
SGSTESETTV NLGFMVAGKL NRVTIQEGQT VHAGQLIASI EPTDYQLGVT IANANVARVQ
DEYNRLTILK ERGSVTPSDY EKVVTGLDEV KARQQLAAKN LRETKLYSPI SGIVARKGAN
PGEIIPQGQP LFQIADIQPI KVRVSVPESE VGQLRLGQSA QVTIPAINGT YTGKISLIGA
VADPASRAYS VKIDLPNPKL QIRPGMIADA RIPSARQSKA LSLPGNAILR DDDQSTYVFV
ADSQKKQAFK RKVTIGKIFA SNVEITSGLT PSDLVVTGGQ QKLQEGASIQ FNQPAQ
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