| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2475 |
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| Symbol | |
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| ID | 8726219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2994718 |
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| End bp | 2996589 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003387293 |
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| Protein GI | 284037363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.241068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.472175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATC AAAAGAGTAT GAATTATATA GCGAAGTGTA TATCGTTTAG TCTGCTGTTG
GGCACAACGA TGATCGCCTG TAACAGTGAT TTTCTCAACA CGCAACCACT TGATAAGGTA
TCGGGTGATG CCGTCTGGGC CGACCGTGCT CTTTCGGAGG CCTTCGTTAC CGATGTGTAC
AACGGTATTC GGGATGGCCT GCTGGATCAA ATGAGTCTGG ACTGTCAGAC CGACAATGCC
TTGTACAGTT TCGGTAAGCA GGACGTGAAC GAAGCCAACG TCAGTCCTTC TAACACGGGT
ACGATCAAAA GTACGATGGA ATGGGGAGCC GTCTACGCCC GGATTCGGGC TGCTAACATC
GCCCTGGCGA AATTAGCCAA GCCTACGTTT GATAATAGTG GTGATCTGGC TGGACGGATG
CGTGGTGAAA TGTACTTCAT GCGCGCCTAT TTATATAACC AGTTATTGCG TTATTACGGC
GCCATTCCTA TCATCAAAAC GCCCTACACG CTGGATGAAC CGGATTTTAC GGTTGCCCGT
AATACATATG AAGAGTGCGT CAATGCTATC GTTACCGATC TGGATTCAGC CACGGTGCTG
TTGAAAGGTC GAAGCATGGC GGCTGGCCGG GCTACAATGG GCGCTTCTTT GGCCCTTAAG
TCACGGGTGC TGTTGTACGC AGCCAGTGAC CTGCACGACA TCCCTACAGC CAAGGCCAAG
TCGAGTGTAA TCGCCAGCTT CAGCAAGCCT GAACTGCTGG GTTATGTGAG CGGTGACCGG
ATGGCGCGCT GGCAGAAGGC CAAGGATGCG GCCAAAGCGG TGATAGACCT CAACCAGTAC
GGTTACAAGC TAAACCTGGC AGCTCCTGTA TCGGCTGCTG AAGGGCAACA GAACTATGTT
AATCTGTCTT TGTCTCAAAA TGGTGGGGAA ACCGATGGTA TTTTCCTGAA ATACTACATC
CGGGCATCTA ACGACGATTG GGGTTCCTGG TTTCCGCGAA ACAACATGCC TAATGGATAC
CATGGCTGGA CATCCAGCGA ACCGACCCAG CAAATGGTTG ATAACTATGA GATGATGGAT
GGTACTAAGT TCGACTGGAG TAATCCAGTC CATGCCTCAG CTCCCTATGA AAACCGCGAT
CCTCGCTTTT ATGCCTCTAT CCTATATGAT GGTGCGCAGT GGAAGCCCCG CACACCAGAC
GGAGCGGGTA TTGATCCCGC CGGACAGATT CAGATGGGTG AGTACGAAGT AGGCTCCTCC
GCTGCGCCAA CTAAGTTTTC GGGTCTGGAT ACGCGTAACA GTACCATTGA GAACTGGAAC
GGTACCTGGA CGGGGTACGC CATCCGCAAG TTCTTTAATA CCGACGTTTC GATTGTGGAT
CAGAACATCC GTCAGGAAAT TCCCTCCATT CAAATTCGGT TCACGGAAGT GGTGTTGAAC
TACGCTGAAG CCTGTCTGAT GCTGGGTCAG GAAGCGGAAG CCAAGAAATG GATCAACGCC
GTTCGCTTCC GGGTAGGTAT GCCCGCCGTC ACCGAAACAG GTGCTGCCCT GATAGCGCGC
TACCAGAATG AACGAAACGT CGAAATGTTT TTGGAAGATC AGCGTTTCTA CGACGTTCGC
CGGTGGATGA TCGCCCCAAC TGTACTTGGC CAGCAAGCCC GGATTATTTC GATTACAGGT
AAGCTCAAGC CAGGCAAGAC GGTGACAACC TACAAGTACA GCAAGGAGAA CTACACATAT
ACGTACAGTG TACAGGACCT GGGTACGGGT AAGGAGAATC GCAGATGGGC GGATAAGATC
TACTTCCTGC CCATTAGCCG GGACGAGATC AACCGCAACA ACAAGCTGGT TCAGAATCCG
GGCTATGAGT AA
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| Protein sequence | MINQKSMNYI AKCISFSLLL GTTMIACNSD FLNTQPLDKV SGDAVWADRA LSEAFVTDVY
NGIRDGLLDQ MSLDCQTDNA LYSFGKQDVN EANVSPSNTG TIKSTMEWGA VYARIRAANI
ALAKLAKPTF DNSGDLAGRM RGEMYFMRAY LYNQLLRYYG AIPIIKTPYT LDEPDFTVAR
NTYEECVNAI VTDLDSATVL LKGRSMAAGR ATMGASLALK SRVLLYAASD LHDIPTAKAK
SSVIASFSKP ELLGYVSGDR MARWQKAKDA AKAVIDLNQY GYKLNLAAPV SAAEGQQNYV
NLSLSQNGGE TDGIFLKYYI RASNDDWGSW FPRNNMPNGY HGWTSSEPTQ QMVDNYEMMD
GTKFDWSNPV HASAPYENRD PRFYASILYD GAQWKPRTPD GAGIDPAGQI QMGEYEVGSS
AAPTKFSGLD TRNSTIENWN GTWTGYAIRK FFNTDVSIVD QNIRQEIPSI QIRFTEVVLN
YAEACLMLGQ EAEAKKWINA VRFRVGMPAV TETGAALIAR YQNERNVEMF LEDQRFYDVR
RWMIAPTVLG QQARIISITG KLKPGKTVTT YKYSKENYTY TYSVQDLGTG KENRRWADKI
YFLPISRDEI NRNNKLVQNP GYE
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