Gene Slin_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2209 
Symbol 
ID8725947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2678792 
End bp2679502 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387030 
Protein GI284037100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00230458 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGACC TTGTACTATT CTTGTTGCTT CTGCTGACAC CCTTCTCTTC ATGGGCGACC 
TGGTCAATCA TCATTATTAA TCCCAAAACG GGTGAAATCG GCATCGCGGG GGCATCCTGT
ACCTACAACT GTAGTGGCAT TGGTAAAATC ATTCCTGGTC AGGGAGCCAT CATTGTTCAG
GCCATGAGCA ATGCTGACGC CAGACGACAA GGAGCCCGCA TGATTCAGGC TGGACATACA
CCTCAGGCGA TTATCCATGC CTTACAAGAT CCCGCTTTCA AGCCTGAAGA GCAACAGTAT
GCTGTGGTTA CCCTGCAACA GATTGACAAA CCAAGCACCT ACACCGGAGC GGCCACAAGT
CCTGCTGGTG GTAGTTTGAC AGCGACTGGT ATTTCCGTTC AAGGCAACAC TCTAGCCAAT
CAAGACGTGC TAACCGCTGT TATGCAGGCC GTCGTAAAAG CGCAAACTCA GGACTTACCC
ATGGCTGAAC TGCTCATGTT AGCTCTAGAG GCAGGCTCTC AGGCAGGTGG GGATAAACGG
TGTGGGGAGC AACGGGCCAG CTGTGCATTT ATCCGAATGG CTCGTTCAGA TGAGAAGCCA
AACAAATCGA CTTTGTTTCT GGAATTTTTT GGTCAGAAGC GTGGGGGCCC GAACGCAGTC
CATTTACTAC GGGGCAAGTA TGAACGCTGG AAAGCCAAGC ACGCTAGTTA G
 
Protein sequence
MRDLVLFLLL LLTPFSSWAT WSIIIINPKT GEIGIAGASC TYNCSGIGKI IPGQGAIIVQ 
AMSNADARRQ GARMIQAGHT PQAIIHALQD PAFKPEEQQY AVVTLQQIDK PSTYTGAATS
PAGGSLTATG ISVQGNTLAN QDVLTAVMQA VVKAQTQDLP MAELLMLALE AGSQAGGDKR
CGEQRASCAF IRMARSDEKP NKSTLFLEFF GQKRGGPNAV HLLRGKYERW KAKHAS