Gene Slin_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2159 
Symbol 
ID8725897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2618635 
End bp2619378 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content47% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003386986 
Protein GI284037056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAG TCGTTACTCC TGCATTGACC AATCAGCGAT GGAAAGTGGG CCTACTCTTA 
TTTGGGCTCG GTTTTATAGG GGTCCTTTCC TTGCTAACGG CTGACTTGCC TCTTCAAAAT
CTACCCTCAG CTGTCCTAAA ACAATTTACC CCCGTTCAAC TCAAACTGCT TCTACTCATC
AATCCCACAA TTTTCCTTCT AGTTGCCGTG CTAATTGGCA CCAATTTATA TCAAAAAACA
ACCTTACAGC TTTGGTCTTC TCTCTCCTCG TCGTGGCTTA GAGAGGGCGT ATTGCCGGGT
GTGGTGGCCG GTTTATCCAT TCTAGTAGTA GCCGCTGTTT TTAAATCAGT TATTCCCCTG
GAGTTGCTTC AGCTCGGTGA AGCCAATCAA TTAGGCGTCC TTTCCCGCTT TCTATACGGG
GGGATCACTG AAGAAATTCT GCTTCGATTT GGGTTAATGA CCTTATTGGT TTGGTTGATT
ACGGTGGTGA TTGGCTATCG AACATCTATC GGCTATTGGT TAGCGATTGG TATGGCCGCC
CTGCTGTTTG GGGCTGGCCA TCTACCGGCT TTATATGGGG TGATTAAAAA TCCATCCCCT
TTACTTACCC TCTATATTAT TGTGGGTAAC TCCGTTGCTG GCCTGTTGTT TGGGTGGGTT
TACTGGCGCA AAAACTTAGG GATGGCAATG GTAGCCCATG CGATGGCTCA TGTGGTCTTA
CTGGCCAGCG AAATTATCCA GTAG
 
Protein sequence
MDIVVTPALT NQRWKVGLLL FGLGFIGVLS LLTADLPLQN LPSAVLKQFT PVQLKLLLLI 
NPTIFLLVAV LIGTNLYQKT TLQLWSSLSS SWLREGVLPG VVAGLSILVV AAVFKSVIPL
ELLQLGEANQ LGVLSRFLYG GITEEILLRF GLMTLLVWLI TVVIGYRTSI GYWLAIGMAA
LLFGAGHLPA LYGVIKNPSP LLTLYIIVGN SVAGLLFGWV YWRKNLGMAM VAHAMAHVVL
LASEIIQ