Gene Slin_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1853 
Symbol 
ID8725590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2236665 
End bp2237114 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID 
ProductProtein of unknown function DUF2147 
Protein accessionYP_003386697 
Protein GI284036767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TTCGTTTAGT ACTCCCCCTA TTTACACTCC TTTTGGCACT CACGGCTTTT 
GCACCGGTCG ACGACTCCGA AGCGGTGGTT GGCACCTGGC TAAATGGCAC AAAAAAGGGG
CATATTCAAA TCTATAAACA AGGGGGCACC TATTTTGGCA AGCTTGTCTG GTTAGGTCAG
CCAATAGATC CCGCAACGGG CAAGCCCCGC ACCGACGAAA AAAACGCCGA TGCTTCCAAA
CGGTCGAGGC CCCTAATGAA CATGCTGCTA TTGTATAACT TTAAGTACGA TGGCGGCAAT
GTGTGGAGTG ATGGAAAAAT CTACAACCCG GAAGATGGCA AGGAGTATAA TTGCAAGATG
ACCCTCAAAG ACCCGAATAC GCTGGATGTT CGCGGCTACG TGGGTATCTC GCTTCTGGGC
AAAACCCAGA CCTGGACGAG GATTAAATAG
 
Protein sequence
MKSIRLVLPL FTLLLALTAF APVDDSEAVV GTWLNGTKKG HIQIYKQGGT YFGKLVWLGQ 
PIDPATGKPR TDEKNADASK RSRPLMNMLL LYNFKYDGGN VWSDGKIYNP EDGKEYNCKM
TLKDPNTLDV RGYVGISLLG KTQTWTRIK