Gene Slin_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1843 
Symbol 
ID8725580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2226552 
End bp2227895 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content53% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003386687 
Protein GI284036757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT CACGGAGAGA GTTTATCAAG AAAGCGGCAT TAGGCACCGC AGGGGTCACG 
TTTGGCGGGC TGGCCAATGG TATGTCGGCT AAAAGCTACA ATAAAATTAT TGGGGCCAAC
GAACGGCTAA ATGTGGCCAT TGCCGGACTA GGTCGGCGGT TGAGCGCGTA TTATGACCCT
ATTTCGAGAA AAGAAAGCAA CGTCGAGCTG GTGTACCTGT GCGACGTGAT GAAAAAACAG
CGGGAAGCCG CCGTTCAGAA GTTCTCCAAG CACATCACCT ACACCCCCAA ACTGGAGAAC
GACATTCGGA AAGTCATCGC CGATAAGAAC GTCGATGTCC TGATCAACGC CACGCCCGAC
CACTGGCACG CACCGGGTAC CCGGCTGGCC GTACAGGGCG GCAAGCACGT TTACGTCGAA
AAACCGTGTA GCCACAATCC CCGTGAAGGC GAGATTCTAA TGGAAATTCA GAAGAAGTAC
GGCAAAGTTA TTCAGATGGG TAACCAGCAA CGGTCGGCAC CGGAGTCGAT TGATATTGTA
AACCAGATTC ATAACGGCGT GATTGGAAAA GCCTTCAAAG CTGTTGCTTT TTACGCTAAC
TCACGTGGTG AGGTGCCCAT TCCGAAAAAA GCACCCGTAC CGGATGGACT GGACTGGGAC
TTGTTTCAGG GACCGGCTCC CCGGACGGCC TATACCCACG ATACCTGGGA TTATAACTGG
CACTGGTATG GCTGGCAGTA CGGCACCGCC GAAGCCGGTA ACAATGCCAC CCACGAACTG
GATATGGCCC GCTGGGCGTT GCAGGTCGAG TACCCGGAGT TCGTATCGGT AGAAGCGGCC
AAACGGTACT TTGCCGGTGA TGGCTGGGCG GTTTACGACA CCATGGATGC TACGTTCCGT
TTTCCCGGCG ATAAAATCAT CAAGTGGGAT GGTAATAGCC GGAACGGCTA CAAAACGTTT
GGCAGTGATC GGGGTACGGT CATCTACGGT ACCAATGGCA GTGTATATGT CGACCGGGAT
GGCTACACAC TTTTCAGCCG GGACGGCAAA CCAATTAAAG AAAGCAAATC AAAAGGGTCG
GAGTCGGGTA CGGCTTTGGG CGGTGGTGGC GATATGACCA CACTCCACAT GATGAATTTC
TTCGAAGCCA TCCGGGGTAA AGCCAAACAG AACTCAACCA TCGACGATGG CGCCAAGAGC
ACGCTGCTTT GCCACCTGGC TAATATCTCT TACCGCACAA ACAAATCCTT CCAGGTCGAT
CCGAAGAACG GCCATATCAA AGACGCCGAA GCCATGAAAT TCTGGAGTCG GCAGTACGAG
AAAGGCTGGG AGCCTAGTGT GTAA
 
Protein sequence
MENSRREFIK KAALGTAGVT FGGLANGMSA KSYNKIIGAN ERLNVAIAGL GRRLSAYYDP 
ISRKESNVEL VYLCDVMKKQ REAAVQKFSK HITYTPKLEN DIRKVIADKN VDVLINATPD
HWHAPGTRLA VQGGKHVYVE KPCSHNPREG EILMEIQKKY GKVIQMGNQQ RSAPESIDIV
NQIHNGVIGK AFKAVAFYAN SRGEVPIPKK APVPDGLDWD LFQGPAPRTA YTHDTWDYNW
HWYGWQYGTA EAGNNATHEL DMARWALQVE YPEFVSVEAA KRYFAGDGWA VYDTMDATFR
FPGDKIIKWD GNSRNGYKTF GSDRGTVIYG TNGSVYVDRD GYTLFSRDGK PIKESKSKGS
ESGTALGGGG DMTTLHMMNF FEAIRGKAKQ NSTIDDGAKS TLLCHLANIS YRTNKSFQVD
PKNGHIKDAE AMKFWSRQYE KGWEPSV