Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1843 |
Symbol | |
ID | 8725580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2226552 |
End bp | 2227895 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003386687 |
Protein GI | 284036757 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATT CACGGAGAGA GTTTATCAAG AAAGCGGCAT TAGGCACCGC AGGGGTCACG TTTGGCGGGC TGGCCAATGG TATGTCGGCT AAAAGCTACA ATAAAATTAT TGGGGCCAAC GAACGGCTAA ATGTGGCCAT TGCCGGACTA GGTCGGCGGT TGAGCGCGTA TTATGACCCT ATTTCGAGAA AAGAAAGCAA CGTCGAGCTG GTGTACCTGT GCGACGTGAT GAAAAAACAG CGGGAAGCCG CCGTTCAGAA GTTCTCCAAG CACATCACCT ACACCCCCAA ACTGGAGAAC GACATTCGGA AAGTCATCGC CGATAAGAAC GTCGATGTCC TGATCAACGC CACGCCCGAC CACTGGCACG CACCGGGTAC CCGGCTGGCC GTACAGGGCG GCAAGCACGT TTACGTCGAA AAACCGTGTA GCCACAATCC CCGTGAAGGC GAGATTCTAA TGGAAATTCA GAAGAAGTAC GGCAAAGTTA TTCAGATGGG TAACCAGCAA CGGTCGGCAC CGGAGTCGAT TGATATTGTA AACCAGATTC ATAACGGCGT GATTGGAAAA GCCTTCAAAG CTGTTGCTTT TTACGCTAAC TCACGTGGTG AGGTGCCCAT TCCGAAAAAA GCACCCGTAC CGGATGGACT GGACTGGGAC TTGTTTCAGG GACCGGCTCC CCGGACGGCC TATACCCACG ATACCTGGGA TTATAACTGG CACTGGTATG GCTGGCAGTA CGGCACCGCC GAAGCCGGTA ACAATGCCAC CCACGAACTG GATATGGCCC GCTGGGCGTT GCAGGTCGAG TACCCGGAGT TCGTATCGGT AGAAGCGGCC AAACGGTACT TTGCCGGTGA TGGCTGGGCG GTTTACGACA CCATGGATGC TACGTTCCGT TTTCCCGGCG ATAAAATCAT CAAGTGGGAT GGTAATAGCC GGAACGGCTA CAAAACGTTT GGCAGTGATC GGGGTACGGT CATCTACGGT ACCAATGGCA GTGTATATGT CGACCGGGAT GGCTACACAC TTTTCAGCCG GGACGGCAAA CCAATTAAAG AAAGCAAATC AAAAGGGTCG GAGTCGGGTA CGGCTTTGGG CGGTGGTGGC GATATGACCA CACTCCACAT GATGAATTTC TTCGAAGCCA TCCGGGGTAA AGCCAAACAG AACTCAACCA TCGACGATGG CGCCAAGAGC ACGCTGCTTT GCCACCTGGC TAATATCTCT TACCGCACAA ACAAATCCTT CCAGGTCGAT CCGAAGAACG GCCATATCAA AGACGCCGAA GCCATGAAAT TCTGGAGTCG GCAGTACGAG AAAGGCTGGG AGCCTAGTGT GTAA
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Protein sequence | MENSRREFIK KAALGTAGVT FGGLANGMSA KSYNKIIGAN ERLNVAIAGL GRRLSAYYDP ISRKESNVEL VYLCDVMKKQ REAAVQKFSK HITYTPKLEN DIRKVIADKN VDVLINATPD HWHAPGTRLA VQGGKHVYVE KPCSHNPREG EILMEIQKKY GKVIQMGNQQ RSAPESIDIV NQIHNGVIGK AFKAVAFYAN SRGEVPIPKK APVPDGLDWD LFQGPAPRTA YTHDTWDYNW HWYGWQYGTA EAGNNATHEL DMARWALQVE YPEFVSVEAA KRYFAGDGWA VYDTMDATFR FPGDKIIKWD GNSRNGYKTF GSDRGTVIYG TNGSVYVDRD GYTLFSRDGK PIKESKSKGS ESGTALGGGG DMTTLHMMNF FEAIRGKAKQ NSTIDDGAKS TLLCHLANIS YRTNKSFQVD PKNGHIKDAE AMKFWSRQYE KGWEPSV
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