| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1838 |
|---|
| Symbol | |
|---|
| ID | 8725575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2220822 |
|---|
| End bp | 2221514 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003386682 |
|---|
| Protein GI | 284036752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.617058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.751673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCG TTCTTTCTGC CAGAAACCTC AACAAATACT TCTACGACCC GGAGAAATTC
AGGGTGTTGA CAGATGTTTC CTTTGAGGTA CAAAAAGGGG AGTTTCTGTC CATTGTCGGC
AAATCGGGTT GTGGTAAATC AACGCTGCTT TACCTGCTTT CTACTATGGA TACTGAGTAT
GAAGGGCAAA TAGAAATGGC AGGAACAAAA TTAACGGGGC GCAGTCAGGA CTTTCTGGCT
CACTTTCGCA ATGAGCATCT GGGCTTTGTT TTTCAATTTC ACTTTCTGCT ACCCGAGTTC
TCCGCCCTGC AAAATGTAAT GCTGCCCGGC CTGAAGCTGG GTAAGTACCC GGAGAAGGAA
ATTGAAGAAC GGGCGATGGA AAAACTCCGG TTAATTGGTA TGGCCGACTA CGCCCGCAAA
CCGGCCAGTA AACTATCGGG CGGGCAGCAG CAGCGCGTAG CCATTGCCAG GGCACTCATA
AACGACCCCA CCATCATCAT GGGCGACGAA CCCACGGGCA ATCTGGATAA AGCCAATACC
GAAAATGTGT TCGACATTTT TCGTGATCTT GCCAGCAAAG GACAGACCAT CATTGCCGTG
ACGCACGACC CGGACTTTGC CGCCGGAACG AACCGGACCA TCGAAATGTC GGACGGACAA
ATTATTGGCA ACCATGAAAA TAAAATTCAA TAA
|
|---|
| Protein sequence | MSTVLSARNL NKYFYDPEKF RVLTDVSFEV QKGEFLSIVG KSGCGKSTLL YLLSTMDTEY
EGQIEMAGTK LTGRSQDFLA HFRNEHLGFV FQFHFLLPEF SALQNVMLPG LKLGKYPEKE
IEERAMEKLR LIGMADYARK PASKLSGGQQ QRVAIARALI NDPTIIMGDE PTGNLDKANT
ENVFDIFRDL ASKGQTIIAV THDPDFAAGT NRTIEMSDGQ IIGNHENKIQ
|
|---|
| |