Gene Slin_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1779 
Symbol 
ID8725516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2150619 
End bp2151683 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content53% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003386623 
Protein GI284036693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAA CCGCTACACG GTGGCTTTTG GCCATTGGGT GCCTGTGTTT GACCGTAACG 
ACACAGGCCC AGGAGCGCGG GCGATTTAAA AATAACCTGC GTATTACTCC AAAAACGGGT
TCGAACCCAA ATTTTCCGGT CGTCGAACAG CCGCAAAAAG CGGACGACCA ATTCGAGCAG
GAAGCCACAC AACTGCGCTT TAACAGCCAG TTTGAGCCGA AAAAAGAATT GAACCCGGTT
GTCAGTGAAG ACACCAGTCA AATTGATCAG GGTGAAACAA GTGTTGTTGA AGTCATTGAC
TCTGTACTGG TTGGTACAGA ATGGGTTAAA ATAGCGGATT ATTACGCCGT TTGGGATTCG
CGCACCATCG ACCCTTACAA CATTAACCCC CTCGAATTTG ATGAAGCCAT CGACATCAAA
CTGTACGACC CGCCTGCCAA CCGGTTCTGG TCGCCCCCGC TTAACGAAGG AAAAATGACC
TCGAACTTCG GGTATCGATG GGGTCGCTGG CATACCGGAA CAGACCTCGA CCTGGAAACC
GGTGATCCCG TCTACTCCGC ATTTGATGGT ATTGTTCGCA TTGTTGGCTG GGACGGCAAT
GGGTATGGCC GCTATGTGCT GGTTCGGCAT TATAATGGGC TCGAAACGCT TTACGGACAC
ATGTCCAAAC AAACGGTTGA GCAGGGGCAA TTGGTGAAAG CGGGCGACCA GCTTGGTCTG
GGTGGTAGCA CAGGACGCAG CTCCGGCCCT CACCTTCACT TTGAGACCCG TTACGAAGGC
AACCCGTTTA GCCCGCTGAA CATCTATTCG TTCCCGGAAA ACAAGATCAA CTCCGATCAT
TTTCTACTGA CGGGCTCCGT TTGGGACTAC CTGCGTGGGG GACGGTCGTC GGATAACAGT
TTCAAGCCCA AGTTCAAGCG AACGGTGCTA CACCGCGTAC GTTCCGGCGA AACGCTAAGC
TCTATCGCTG ACCGGTATGG CATGTCGGTC TCGTCGCTAA CACGAAAGAA CCATATGTCG
GCCCGCACAC GCATTCGGCC TGGCCAGAAA CTCCGGGTAC ATTAA
 
Protein sequence
MRETATRWLL AIGCLCLTVT TQAQERGRFK NNLRITPKTG SNPNFPVVEQ PQKADDQFEQ 
EATQLRFNSQ FEPKKELNPV VSEDTSQIDQ GETSVVEVID SVLVGTEWVK IADYYAVWDS
RTIDPYNINP LEFDEAIDIK LYDPPANRFW SPPLNEGKMT SNFGYRWGRW HTGTDLDLET
GDPVYSAFDG IVRIVGWDGN GYGRYVLVRH YNGLETLYGH MSKQTVEQGQ LVKAGDQLGL
GGSTGRSSGP HLHFETRYEG NPFSPLNIYS FPENKINSDH FLLTGSVWDY LRGGRSSDNS
FKPKFKRTVL HRVRSGETLS SIADRYGMSV SSLTRKNHMS ARTRIRPGQK LRVH