Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1461 |
Symbol | |
ID | 8725195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1771263 |
End bp | 1772753 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | exonuclease V subunit alpha |
Protein accession | YP_003386310 |
Protein GI | 284036380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00677876 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.63958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA CCCAAACGGC CGCCCATTTG CTGGCCAAAC GTTTCCCTTT TAAGCCTACA CCGGGTCAGG AACAGTTTTT CGAACAGATC GGCCAGTTTA TCTCCAAGGA AGAAGTTGCC CATTATCGCG ATTGTTTTTT GCTGCGCGGC TATGCCGGTA CCGGCAAAAC CACCCTCGTA GGTACCCTCA TAAAAGTACT TCCCCGTTTT GGCTATAAAT CGGTTCTGCT TGCTCCTACG GGCCGGGCAG CCAAAGTCAT GACGAACTAT GCCAAGAAAC CAGCCCAGAC CATCCACCGG AAAATATACA GACAGGTGGC TGACCCTGGC TCGGGAAATT TGGCTTTTCA GCGGCAGAAA AATTACCACG AAGACACCCT GTTTATTGTC GATGAGGCTT CGATGATTTC CGATGAAGCC GACTTTGGAG GGAAGGGGCT ACTGACCGAC CTGATTGATT TTGTCTTTGA AGGGCCGGGC AACAAGCTCA TGCTGGTAGG CGATACAGCC CAGTTGCCCC CCGTTGGCCG GGAGTTGAGC CCCGCCCTCG ACCGGGGTTT TCTGGCCAGT ACCTTCGACA TGACCGTGTA CGAACAGGAA CTGACCGAAG TCATGCGACA GGACGAAGAA TCGGGAATCT TGTACAATGC GACGGGGTTA AGGATGCTGC TGGACGGCAC CTCACCTACC CCCAAAGCCG TTGGTTTTGA TGCTTTGCTC GATGACAACG CTTCGACCGC AACTGCTGAA ATCCCGCCTA TTCAACTTAA CGTTCGCTCG TTCAGCGACA TTTACAAAAT GCCGTTGACC AAACTGGAAG ACGGTATCCG GTATGCGTAC GACAAATACG GACGGGAGAA TACAGCCATC ATCTGCCGCT CCAACAAGTC GGCAGTACAG TACAACCAGT TTGTTCGACG GATGATTGAC CAGTGCGAGG AAGAACTCGA CGCCGGGGAT ATGCTCATGA TTGCCCGCAA CAACTACACC ATACTTGACG AGGATTCGCC GGCGGGTTTT CTGGCCAACG GTGAATTTGC GGAAGTGCAA AAAATCCGCA ACAAGGAAGA AATGCACGGC TTTCGCTTCG CCACGGTCAC GCTGCATCTG ATTGACTACG AAGAGCAGCC CGATTTCGAC GCCAAAATCA TGCTCGACAC GCTCCATACG CCGGTCCCTT CGCTAACGGC CGATCAGTAC AAGGCACTTT ACGAAAGTGT TGCCAAAGAC TACTTTTACA TTAAAAGCAA GAAAGAACGT TCAGAAGCGA TACGTCGGGA CCCGTACCTC AACGCATTAC AGGTAAAATT TGCCTACGCA CTCACCTGTC ATAAAGCGCA GGGGGGGCAA TGGAGTGCGG TTTTCGTTGA TCAGGGATTT CTGCCGGAGG GTCAGGTGAA CGATGAATTT GTTCGATGGC TGTACACAGC TTTAACCCGC GCCACCGACG AAGCCTTCCT GATGAATTTT AATTCGCAGT TTTTCGGATA A
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Protein sequence | MNETQTAAHL LAKRFPFKPT PGQEQFFEQI GQFISKEEVA HYRDCFLLRG YAGTGKTTLV GTLIKVLPRF GYKSVLLAPT GRAAKVMTNY AKKPAQTIHR KIYRQVADPG SGNLAFQRQK NYHEDTLFIV DEASMISDEA DFGGKGLLTD LIDFVFEGPG NKLMLVGDTA QLPPVGRELS PALDRGFLAS TFDMTVYEQE LTEVMRQDEE SGILYNATGL RMLLDGTSPT PKAVGFDALL DDNASTATAE IPPIQLNVRS FSDIYKMPLT KLEDGIRYAY DKYGRENTAI ICRSNKSAVQ YNQFVRRMID QCEEELDAGD MLMIARNNYT ILDEDSPAGF LANGEFAEVQ KIRNKEEMHG FRFATVTLHL IDYEEQPDFD AKIMLDTLHT PVPSLTADQY KALYESVAKD YFYIKSKKER SEAIRRDPYL NALQVKFAYA LTCHKAQGGQ WSAVFVDQGF LPEGQVNDEF VRWLYTALTR ATDEAFLMNF NSQFFG
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