| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1265 |
|---|
| Symbol | |
|---|
| ID | 8724998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1552301 |
|---|
| End bp | 1553104 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003386114 |
|---|
| Protein GI | 284036184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.463266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACG TAGAAACCAA CGGCATCAAT TTATATTACG AAGAGCGGGG GAGTGGAGAG
CCACTGCTGC TGATTATGGG CATCACCGCC CCCGGTTCCG TTTGGGCCAG ACATGCCGAT
GACTGGCAGA ATCACTTTCG CTGTATCCTT AGTGATAACC GGGGCGTAGG TCGGTCCGAT
AAGCCAGCAG GTCCGTACAC AACTGCCCAA ATGGCCGACG ATTATGCCGG GCTTATTGAT
ACCCTCGGGC TGGGAAAAGT ACGGGTTGCG GGTGTGTCGA TGGGGAGTAC CATTGCCCAG
CAATTAGCGT TGCGGCATCC GGATAAAGTG CATTCGCTGG TGCTGCTCTG CCCCTGGGCC
CGCTGCGACC GTACCGCCGA AGCGATCTTC CGGCACATGG CTACCATCAA GGCCCGGCTC
CGTCCCGAAG AGTTTGCCAA TTATATTCAG TTCCTGATCT ATGCCAAGCG TAGCTGGGAT
GATGATGCCA CCTTTGCCGG CCTTGTGGAG GGACGGCAGC AGGCCGCTAT TGATCCAATG
CCGCAGCCAC TACATGGTTT GGAGGGTCAG GCTGAGGCCT GCATTACTCA CAACACCCTG
GCCGATTTAC CGTCCATTGA CAAGCCCTGT CTGGTCATTG GTGGTCGGAA AGATATTTTT
ACCCCTGTCT GGATGACCGA AGAAGTGGCG GGAGCCATTC CGAACAGCGA ACTACATCTG
TATGAAGACG CTGGTCATGC TTTCCATTGG GAGTGTATCG ACGATTTCAA CCCACGAGTG
CGAGATTGGC TGCTGGCTCA TTAG
|
|---|
| Protein sequence | MPYVETNGIN LYYEERGSGE PLLLIMGITA PGSVWARHAD DWQNHFRCIL SDNRGVGRSD
KPAGPYTTAQ MADDYAGLID TLGLGKVRVA GVSMGSTIAQ QLALRHPDKV HSLVLLCPWA
RCDRTAEAIF RHMATIKARL RPEEFANYIQ FLIYAKRSWD DDATFAGLVE GRQQAAIDPM
PQPLHGLEGQ AEACITHNTL ADLPSIDKPC LVIGGRKDIF TPVWMTEEVA GAIPNSELHL
YEDAGHAFHW ECIDDFNPRV RDWLLAH
|
|---|
| |