| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1130 |
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| Symbol | |
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| ID | 8724863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1380513 |
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| End bp | 1382882 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003385980 |
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| Protein GI | 284036050 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.453504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.447933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTC TTTCTCAAGT GATACGAACT GTTTTTAAAG GCACCCTGCT TGGCTGGCTG
GGCTTCGCTA CACCAGGATA TGCGCAGACC CGCATTTTTG TGTCTCCGTC GGGAAGCGAT
ACCCAGGCAG GTACACAGGC ATTACCCGTG GCAACGCTCG AAAAGGCACT GGAGAAAGTA
AAAACTGCCC CTCAGAACGA GGTACATATC TACCTACGTA GAGGCACTTA TTATTTAGCC
AAAACGGCAC GCATAACCCC GCAACTGATC GGCAATAAGC GGCTTTTGAT CAGTGCATTC
CAGAACGAAC CCGTTGAGCT TAACGGCGGG CGGAAACTGG CGTTGCGCTG GCAAAAGTCC
GGCGACAGAA TCTGGACGGC CAACGTAGCA GGCGAACCGT TTGAGCAACT ATACGTCAAC
GGGAAGAAGC AGATATTGGC TCGTTATCCA AACTATGATT CGACAGCCCG GGTGTTTAAC
GGAACAGCCG CTGACGCCAT CAGCCGAACA CGAATCAGCC GGTGGAAAAA CCCGTCTGGC
GGCTACGTTC ACGCCATTCA CCAGCACGAG TGGGGCGATT TTCATTACCG TATAACGGGT
AAATCAGGCG ATACGCTCAC CTACGAAGGG GGCTGGCAGA ATAACCGCCC GATGGGGATT
CATAAGAATC AGCGGTTTGT CGAAAATATC TACGAAGAAT TGGATGCTCC GGGCGAATGG
TTTTATGACA AAGCCACCCA AACGCTTTCG TTTATGCCGC CTTCTGGCCT TGACCTGAAT
ACGGCCGTTG TTGAGGTGTC GCGGTTGAAA TCGTTGGTTG AGTTGGTTGG AACACCCAAA
ACTCCGCTTC GTCAGGTGCG TATTCATGGC ATACGGCTGG TTAATACCGA GCGGACGTTT
ATGGAGCCGT ATGAACCGCT GCTGCGTAGC GACTGGATGT TATACCGGGG TGCCGCGATT
TATCTGGAAA ACACCGAGAA TTGCCGCATC GAAGCCTGCG AGCTTACCCA TCTGGGTGGA
AACGCCATTC TGGTGAGTCG GTATAATCGG AACACATCGG TCGATGGCTG TCATATTCAT
CACATAGGAG CTACTGCCAT CGGGTTTGTG GGCGATACGT CGGCGGTTCG TTCACCTGCT
TTTCGGTATG AGTGGGTTGT GCCTTATGCT GACATGGACC TGCGGCCGGG GCCAAAAAAC
AACCAGTACC CGGCAAACTG CACCGCCAGC GACAACCTCA TTCACCACAC CGGCGAGATT
GAAAAACAGT CTACCGGCGT TGAAATTTCA ATGGCTTCCG ACATAACGGT ACGCCATAAT
ACGATTTATC AGCTGCCCCG CGCGGGGATC AATATTGGTG ACGGCACCTG GGGCGGGCAT
TTGCTTGAGT TCAATGACGT ATTCGACACC GTACTGGAAA CGGGCGATCA TGGTTCGTTT
AATTCCTGGG GGCGCGACCG CTTCTGGCAC CCCAACCGGA AAACGATGGA TAGTCTGGCA
GCCGCTCACC CGGAGCTGAT TAAACTCGAT GCGCAAAAAC CAGTCGTTAT CCGGAATAAT
CGGTTCCGCT GTGACCACGG ATGGGATATT GATCTCGACG ACGGCAGCAG TAATTACATC
ATTGCCAATA ACGTATTGCT AAACGGCGGG CTGAAGTTTC GGGAAGGGTT TTACCGGACT
GCCGAAAACA ATGTGATCGT CAATAACTCC TTTCACCCGC ACGTCTGGTT CAAAAACAGT
GAGGATGTGT TTCGGAGGAA CATCGTCATG CGGCCTTACT TTCCTATTCA GATCGCTTAT
TGGGGTAAAG AGATCGACCA TAATTTATTT CCGGACCAGA CTGCTTTGCA AAAGGCGCAG
CAGAACGGTA CCGATCTTCA TAGTCAATTT GGTGATCCGC AATTTATCAA TCCGGGGCAG
GGCGACTATC GGGTAGCGCA GACAAGTCCG GCACTGGCTG CTGGCTTCCG GAATTTCCCC
ATGAATCAGT TTGGTGTGCA GCGGGCATCG TTACGAGCCT TGGCCCGTTC GCCTAAACTT
CCCCAGCTAA TTAACGACCG GAAAGAGTCG AACGTTACGG AGAAGACCTG GTTAGGCATT
CGGATACGTA ATGTGAATGG ACTGGGCGAC CGGTCGGCGT TCGGGTTGCC GGATGAAAAA
GGGATTGTTG TGCTGATTGT GCCTAAAGAA AGCAAACTGG CTACGTCGGG TTTGCAGAAA
GATGATGTCA TTCGAACTAT CAACGGCACC GATGTAGCAA CCATCGCTCA GTTGGAGAGT
ATACAGCAAC AACTACACTT CATGAGCACC ATACCCGTTG GCGTAATGCG AAATCAACGG
ATCATAGATG TACAATTACC CATGAAGTGA
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| Protein sequence | MTCLSQVIRT VFKGTLLGWL GFATPGYAQT RIFVSPSGSD TQAGTQALPV ATLEKALEKV
KTAPQNEVHI YLRRGTYYLA KTARITPQLI GNKRLLISAF QNEPVELNGG RKLALRWQKS
GDRIWTANVA GEPFEQLYVN GKKQILARYP NYDSTARVFN GTAADAISRT RISRWKNPSG
GYVHAIHQHE WGDFHYRITG KSGDTLTYEG GWQNNRPMGI HKNQRFVENI YEELDAPGEW
FYDKATQTLS FMPPSGLDLN TAVVEVSRLK SLVELVGTPK TPLRQVRIHG IRLVNTERTF
MEPYEPLLRS DWMLYRGAAI YLENTENCRI EACELTHLGG NAILVSRYNR NTSVDGCHIH
HIGATAIGFV GDTSAVRSPA FRYEWVVPYA DMDLRPGPKN NQYPANCTAS DNLIHHTGEI
EKQSTGVEIS MASDITVRHN TIYQLPRAGI NIGDGTWGGH LLEFNDVFDT VLETGDHGSF
NSWGRDRFWH PNRKTMDSLA AAHPELIKLD AQKPVVIRNN RFRCDHGWDI DLDDGSSNYI
IANNVLLNGG LKFREGFYRT AENNVIVNNS FHPHVWFKNS EDVFRRNIVM RPYFPIQIAY
WGKEIDHNLF PDQTALQKAQ QNGTDLHSQF GDPQFINPGQ GDYRVAQTSP ALAAGFRNFP
MNQFGVQRAS LRALARSPKL PQLINDRKES NVTEKTWLGI RIRNVNGLGD RSAFGLPDEK
GIVVLIVPKE SKLATSGLQK DDVIRTINGT DVATIAQLES IQQQLHFMST IPVGVMRNQR
IIDVQLPMK
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