| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0956 |
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| Symbol | |
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| ID | 8724686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1158183 |
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| End bp | 1159679 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003385806 |
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| Protein GI | 284035876 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.587305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.507784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AACTTCTTAT CGGAACCCTT CTCCTTTGTC TGGGCCAGTT TTCGTGCAGT
GATGATTTGC TGGTCACCAC CGACCCGACC CGTATTGGCA CCGACCTGTT TTATAAAAAT
GAAACGCAGT TTTTGCAGGC GCTAAACGGC GTATATGGGC AGTTACAGAA TATTACCAGC
GCAGCCTATA TCTTCCAGGA GTTTCCGTCC GACAATACCA CACTCGATTT CAACCCGCTC
GACCGGGGCG GAGCGGCCGG CTGGGAAGCC TTTGAGTTCT CGACCGTTAA CCAGGGCAAT
GGCGAAATTG CCAACGTCTG GAACCTGTAT TATTCCGCCC TGTACAACAC CAACTATACC
CTGGAAAAAC TGGCCGGTAG TACGCTCGAT GCTGCCGTCA AAGCGCCCAT CGAAGGGCAG
TTGAAATTTT TGAGAGCTTA CTTTTACTTT CATCTGGTTC AATATTTCGG GGATGTCGTA
CTGGTTACGT CGACGCTGGA TAAGCCTGAT AAAGCCTTTG AACTGGTTCG GTCTCCTCAG
GCCGATGTGT GGGCGCAGAT CGAGAAGGAT TTAAAAGAGG CTGTTCCTTT ACTACCGACT
TCATTTCCCG CATCGCAGTT GGGTCGTGTT ACCAAAGGGG CTGCTTTGGG CTTATTGGGG
AAAGTTTACC TGACGCAGAA GAAATACAGC GATGCAGTGA CGACCCTGAA ACAGATAACC
GGCTACTCGC TAAATGCCGT CTATTCGGAT AATTTCAATC CTGCCCGAAA AAACGGCCCA
GAATCCCTGT TTGAAATTCA GTATCAGGGG GGCAATGACT TGGGCGAATG GAGCACCTTT
GCTTACGTAT TCGCTCCCCG GCTGTCGGCA GGGGCCGTAA CGGGATTTGC CAACACCACG
CCCGGTGGAC GGAATATTCC GACCAATGAC ATGATTGCGG CCTACGAACC CGGCGATCTG
CGGAAGGATG CTTCGCTAAA AACCAGCTAT ACCCTGAACG GTACGGTCGT TCCTATCCCG
TACGTGATTA AATTCACGTA TCCCCACACC ATCACGGGTC GTACGGACAA CAACTGGCCG
GTTCTGCGGT ATGCCGATGT GCTGCTCATG CTGGCCGAAG CCATCAACGA GCAGTCGGGT
CCAACGGCCG AAGCATACGG GCTTGTCAAT CAGGTGCGTA CACGGGCAGG GCTCAAGGCG
TTGGATGGTC TCGATAAGGC AGCTTTCAAA GCGGCCGTGC TTAGGGAGAG ACGCGTGGAA
TTGGCTTTTG AGAACCATCG CTGGTTCGAT CTGAAACGGA CCATGACACC CGCCGAACTG
ACTGCCTTCA TGAACGCACA CGGAGCCAGA GAAAAAGCAA AGCCAACAGT AGATCGGGGC
GGTATAGCGT TTAATGCATT GGATTATGTT TACAGCGATT ATGAATATTT TTTCCCGATT
CCGGCACCTC AAATTCTGAT TAATAATAAG CTAACTCAGA ACGCGGGTTA TCAATAA
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| Protein sequence | MKNKLLIGTL LLCLGQFSCS DDLLVTTDPT RIGTDLFYKN ETQFLQALNG VYGQLQNITS
AAYIFQEFPS DNTTLDFNPL DRGGAAGWEA FEFSTVNQGN GEIANVWNLY YSALYNTNYT
LEKLAGSTLD AAVKAPIEGQ LKFLRAYFYF HLVQYFGDVV LVTSTLDKPD KAFELVRSPQ
ADVWAQIEKD LKEAVPLLPT SFPASQLGRV TKGAALGLLG KVYLTQKKYS DAVTTLKQIT
GYSLNAVYSD NFNPARKNGP ESLFEIQYQG GNDLGEWSTF AYVFAPRLSA GAVTGFANTT
PGGRNIPTND MIAAYEPGDL RKDASLKTSY TLNGTVVPIP YVIKFTYPHT ITGRTDNNWP
VLRYADVLLM LAEAINEQSG PTAEAYGLVN QVRTRAGLKA LDGLDKAAFK AAVLRERRVE
LAFENHRWFD LKRTMTPAEL TAFMNAHGAR EKAKPTVDRG GIAFNALDYV YSDYEYFFPI
PAPQILINNK LTQNAGYQ
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