Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0952 |
Symbol | |
ID | 8724682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1151669 |
End bp | 1152181 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | phage shock protein C, PspC |
Protein accession | YP_003385802 |
Protein GI | 284035872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.441408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA GATTAGAACG TATAGCAGAC CAGGCCCAGA TCGGGGGCGT CTGCGCTGGT TTAGCCGACT ATTTTGGAAT TGATCGCACC TTGGTGCGCG TGCTTTTTGT GGTTGGGATT TTTCTGCCTC ATTTCCCGGC TTTCATCATT TATGTTATCT TGTGGATCGC ATTACCAGAA CGTCGTTTCG CGGGTTCTGC GGCTCAATCA ACTATTTACG CAAACCCTGT TTTCTCCATG AATCCTTACA ATCCTAATAA ACCTGCATCA CCCGACCGTA GCCTGGTTGG TGGAGCTGTC CTGATTTTAC TCGGTATCAT GTTCCTGATA GATCGCTATT TCGATGTCAG TTTCGGCGAT CTGTGGCCGT TTATTCTGAT AGCCATTGGT CTATGGCTGA TCTTCCGGGA CCGGATCAAA ACTCCGTTCG ACAACAATCA GAACGATCCC TACAAAAGTG ATCCCTATAA GAGTGATCCA ACCCCAAACG ACCCCAATAA CGGAACACTA TAA
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Protein sequence | MNKRLERIAD QAQIGGVCAG LADYFGIDRT LVRVLFVVGI FLPHFPAFII YVILWIALPE RRFAGSAAQS TIYANPVFSM NPYNPNKPAS PDRSLVGGAV LILLGIMFLI DRYFDVSFGD LWPFILIAIG LWLIFRDRIK TPFDNNQNDP YKSDPYKSDP TPNDPNNGTL
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