Gene Slin_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0952 
Symbol 
ID8724682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1151669 
End bp1152181 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content47% 
IMG OID 
Productphage shock protein C, PspC 
Protein accessionYP_003385802 
Protein GI284035872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.441408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA GATTAGAACG TATAGCAGAC CAGGCCCAGA TCGGGGGCGT CTGCGCTGGT 
TTAGCCGACT ATTTTGGAAT TGATCGCACC TTGGTGCGCG TGCTTTTTGT GGTTGGGATT
TTTCTGCCTC ATTTCCCGGC TTTCATCATT TATGTTATCT TGTGGATCGC ATTACCAGAA
CGTCGTTTCG CGGGTTCTGC GGCTCAATCA ACTATTTACG CAAACCCTGT TTTCTCCATG
AATCCTTACA ATCCTAATAA ACCTGCATCA CCCGACCGTA GCCTGGTTGG TGGAGCTGTC
CTGATTTTAC TCGGTATCAT GTTCCTGATA GATCGCTATT TCGATGTCAG TTTCGGCGAT
CTGTGGCCGT TTATTCTGAT AGCCATTGGT CTATGGCTGA TCTTCCGGGA CCGGATCAAA
ACTCCGTTCG ACAACAATCA GAACGATCCC TACAAAAGTG ATCCCTATAA GAGTGATCCA
ACCCCAAACG ACCCCAATAA CGGAACACTA TAA
 
Protein sequence
MNKRLERIAD QAQIGGVCAG LADYFGIDRT LVRVLFVVGI FLPHFPAFII YVILWIALPE 
RRFAGSAAQS TIYANPVFSM NPYNPNKPAS PDRSLVGGAV LILLGIMFLI DRYFDVSFGD
LWPFILIAIG LWLIFRDRIK TPFDNNQNDP YKSDPYKSDP TPNDPNNGTL