Gene Slin_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0920 
Symbol 
ID8724650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1095802 
End bp1097247 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content54% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003385771 
Protein GI284035841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.651175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC GTAACAAACT GACCCTTGTT TTTACCAGTC TGGCACTGGC CATCCAGCTT 
ACCTTCTCGG TATTTATTTA CGCGTTTTAT TCGGTATATC GTCAGCAGGA GTTTTACAGT
CAGTTGCAGG CCAAAGCCAG GGTGTACGGC CGGGTGCTGA TCGGGCGGCA GGATGTAACC
CATCTGCTGG ATGCCCGCGT GCCCGCCAGC GATTTGATTA CCCTTACGAG CGAGCAGGTT
AGCATCTACG ATAGTCGTTT GTCTCTTCTC TTCGATAATA AGTATGCCGA ATACGACCAG
CAGGAACAGA AACTGTTGCC TCAGTTACGA CAGGTAAGCC AGGCGCCCGA TGGGAAGCGG
CTGACCCAGG TACCAATACA GCACTTTACC ATTGGGCAGG TTGAAGGGAT AGGCACAACG
TTTGCGCACC GGGGCCAAAC CTATTTTATA TTCGTGGCCG GTCTTGATCA GTTAGGGCGT
TCCAAGCGGT ATAACCTGCT GATTATTCTG CTGATTGGCA ACCTGGGTGG GCTGATGCTG
ATCTTGTTGG CGGGCTGGTA TTTTGCCGGT AGATTTCTGC AACCGCTCAG TGCCCTGACA
CAGACGGTAC GGCACATTTC AGAAGCACAT CTCCACACTC GCCTGCACGA AGGTAACCGG
CGGGACGAGA TTGCCCAACT AGCCATCACC TTTAATGCCA TGCTGGAGCA GTTGGAGCGT
TCTTTTGAGA GCCAGCGGCA GTTTGTTGCC CATGCATCGC ACGAGTTACG CACTCCGCTT
ACCAATCTAC TGGGTACGCT GGATACCTCC CTTACCTACG ACCGGGAGGT CGAAGCGTAC
CGGCTTAGCA TGGAGTCGGC CATTGACGAA GTTCGCAAGG TCATTCACCT GACTAACAGC
CTGCTGAGTC TGGCTAAAAT TGGTAGTGAG CAACTGGCAC CCGTCGCGGT TCGGCTGGAT
ACCTGCCTGC TGGAAGCCGT TACCCAGGTA CAGCGCAAAT ACCCGGAGCG GGCTATAGAG
CTTACCTTCG ACGACGGGTT GGATGGGTTC TTTTTCGTTA AAGGCACGGC TCCGCTTCTG
ACCACCGCTC TCGCCAATGT TATTGATAAT GCCTGTAAGT ACTCCCAAGC CCCTGTTCAG
GTAATTCTGC AACAGGTCCG TAACGAAACG GAAACGTATG AAGTACGCGT AATTGACCAC
GGCCGGGGTA TTGCCCCCGC CGACCGACCG CACGTTTTCA AACCATTGGT TCGGGGCAGT
AATGTCGGTC AGATAAACGG GTTTGGCATT GGTCTGGCGA TTGCCCAACA GATCATCCAG
CTCCACCACG GACAGATTAC CCTGGAGCCA ACCCATGTGG AAAACGATGC TGCGGGCCAT
GCAGGTACCA CTGTTACCAT TCAACTGCCG GCGGCTGAAG AAGATAACGC GCCCCTGACC
GTCTGA
 
Protein sequence
MLIRNKLTLV FTSLALAIQL TFSVFIYAFY SVYRQQEFYS QLQAKARVYG RVLIGRQDVT 
HLLDARVPAS DLITLTSEQV SIYDSRLSLL FDNKYAEYDQ QEQKLLPQLR QVSQAPDGKR
LTQVPIQHFT IGQVEGIGTT FAHRGQTYFI FVAGLDQLGR SKRYNLLIIL LIGNLGGLML
ILLAGWYFAG RFLQPLSALT QTVRHISEAH LHTRLHEGNR RDEIAQLAIT FNAMLEQLER
SFESQRQFVA HASHELRTPL TNLLGTLDTS LTYDREVEAY RLSMESAIDE VRKVIHLTNS
LLSLAKIGSE QLAPVAVRLD TCLLEAVTQV QRKYPERAIE LTFDDGLDGF FFVKGTAPLL
TTALANVIDN ACKYSQAPVQ VILQQVRNET ETYEVRVIDH GRGIAPADRP HVFKPLVRGS
NVGQINGFGI GLAIAQQIIQ LHHGQITLEP THVENDAAGH AGTTVTIQLP AAEEDNAPLT
V