Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0903 |
Symbol | |
ID | 8724633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1076346 |
End bp | 1079456 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Lantibiotic dehydratase domain protein |
Protein accession | YP_003385756 |
Protein GI | 284035826 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.547709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATCG ATTTGGCCAA TTTCTATCTA TTGCGGGTCC CTGCTCTTGC TTTTCTCAGT GTGTCGACGC ACAGCGAAGA GGCCGACGCT CAATTGAAGG CGTTATGGGA GGAAGGAACA CTTAGCGAAG CACTCTTCGT AGCCTCACCT TCACTTTACC AGCAAACCAT AGACCACCTG CGAACAACTG GCTGGCCAGT GCCACCTGCC TTCCGCCGAA CGCTCTGGAA ATATGCGCTG CGTATGAGTA CCCGAGCCAC ACCATTCGGG ATAATGGCGG GCTGCTCAGT AGGGGCAATA GCCAAGGCAA CGGAGGTGAC CTTTGGTAAA GAGCTGCGTT TCGTTCCTCA CCATCGACTG GATATGAGCT GCATTGCCCA GCTGGTAAGG GAACTTACAA ACGACCCTCT TATCCGGCCG CAGCTACGGT TTTCCCCTAA TAACAGTCGC TACATCGTTG GTGATGAATT GCGCTACGCC GAACACGACG ATAACGGACA GGAGCGGCAC TATTTTACGG CTTCTGTACT AATTTCTACT CCATTGGAAG CCGTGCTACA ACGGGCACAA AGTGGGGCGA CATCTGCTCA ATTAGCCGAG ACATTAGTAG CTATCGGAAT TACGTTGGAT GCTGCCACCA CATTTGTGGA TCAACTGATT GAACAGCAAT TGCTAATCAG TGAGCTTGAA CCGATGCTGA CCGGACCTCC CATGCTGATA CAACTGCAAA GCCGGTTACG GGAGTTTACC GGAACCGATG CCATACTGGA GGTTTTGACA GCTATAGGCT CTCTGCTTGC CTCAACAAAC ACAGACGCTT GCACGACCCA TCAAAGGGTT TTGTCCACAT TGACCCGTCA TTTTTCTCCC CCCCTATCTC AACATCTGAT CCAGACCGAC TTATTCGTTA ACACACCTGT CAATCAACTC AACCGGCGTG TCGTGCAAAC CATTCTTCGG CAAATAGAGC AGTTACTCCC GTTGCACCGC CCCCGTCCAA ATGCACAGTT AGTCAGCTTC GCCCAGCGGT TTCGAAGTCG GTACGAAGAC CGTACTATAC CGCTGCTGAA GGCGTTGGAT GCTGAGTTTG GGGTTGGCTA TGGCGACGCT GTCGGCACCG AATCGGATTA TTCTTCTCTA CTGGATGGCT TATCGTTCGT GGCAGCTTCT GAATCGAACG CGTTCACTTG GGAGGCTTAT GAGAACCTTT TAGTGGCAAC GTTTAGTCGG TCACTACGGG AGCATCAACT GGCGGTCGAA TTGACCGACG ACGATTTACA TTCGTTAGGT ACGGCTAATG CACCAACCCT ACCCGATAGT TTTTATTTAT TCGGCAACCT ACTCGGCACA TCATCCATGG CCGTGGATCA AGGAGATTTT AAATTTAATC TGCTAGCTGC GCAAGGCCCA TCGGTCGCTA ACTTGTTGGG GCGTTTTTGT GCACATTCGA GGGTATTGAC GAATCACGTT CGCGCATGCC TGCACCGGGA AGAACAGCAG CGACCCGATG CTATTTTCGC CGAAATTATT CACTTGCCTG ACGACAGGGT GGGTAATATT CTCCAGCGGC CCGTCCTTCG CCGGTACGAG ATACCCATCG TTAACCAAGC ATCGGTTGAT GAATCGGACC AACTGTATCT AAACGATTTA CATGTCAGTG TACGGACAAA TGGCCGAATT AGTTTGTGGT CAGAACGACA CCAGAAGGAA GTTATTCCCC GGTTGTCTAC GGCCCATAAC TACCGCTTTG GCCCAAGCAT TTATCAATTT CTGGCCGACT TGCAACACCA GGACAGTTCG CTGAATATAT ACTGGGATTG GGGGCCACTC CGCGAACAGC CCTTTCTCCC CCGGATTAGT TATCGGAACG TAATCCTAAG TCGGGCACGG TGGCTCCTGC GTTCGGTATC CCTACCCCTT GGTTCGACTG ACGCGCTTAA AAGTCACCTT CGCACAACCT ATCAATTACC CCGCTGGATT GCCGTTGCTG ACGGAGATAA TGAATTAGTC CTTGATCTGG ATACGGATCT GGGGTGGCAA CTATTGGCCG AAGAAGTCCG GCGGCAACCT ACCGTTCATT TAGTAGAATG GGTAGCGACG CCAGAGCAGT GCTGGCTTCG CGATGATAAG GGAGCTTACG TGAACGAGAT TGTCATCCCG TGCCAAACGC TAGCTCCCTC ACCAAGACAT CCTTCTCCCA TTGAGCAGCC CGCGTTTTCG CGGCTGATAA ACCGGCAAAA TGGAGCCGAC GGGTGCCCTG CCGATGAACA GGTTATGCGG TCTTTTGATC CCGGTAGTGA ATGGTTATAC GTCAAATTAT ATTCTGGGGT GCAGATTGCC GATGAACTGC TCAAGAAGAT GATTTTCCCG TTTGTTCAGG AACTACTGAC GGCAGGAACG ATTCAAAATT GGTTTTTCGT TCGGTATGCT GATCCAGAAA CACACCTTCG TTTACGGCTG CAATGCACGA TTCCTAAATT CTACGGTACA ATTCTGGACC GGCTGTCGGA GTGGACAGCA CCGTACCGTA AGTCAGGGGT CATATACCGG GTGCAGATTG ATACGTATGA ACGTGAGCTT GACCGCTACG GAGCCATTAC TATAACTGAA ACGGAACGCC TGTTCGCGGC CGATAGCTGG GCCATACTGC GTTACTTAGT GCAAGAGACT AATTCCGCTG ATCGCTGGCG GTTTGCAATG CAAAGCTGCG ATAGCCTATT AGCTGATTTT AACGTAGACA CAAGGGAAAA AGTCAACTTA TTGCGACACT TGCAGGAACA GTTCCTGGCT GAACACCAAG CCGACCGAAC CCTGCGGCAA CAGCTTAACG CCCGCTTCCG GTCGGAACAT GACCGGATCG CCTATGACCT TTCCGGTCAT CAGTCTACAG GAAACTCTAC GACCAGTATC CTTGTAGAAA GGTCGACCCT TTTACGGCCT TGCGTTCGGG ACATCACCTC AAAGTGTCCC AGTTCATCAA TACCAGACCT GCTGGCGAGC TACATGCATA TGAGTTTAAA CCGCTTATTT GTCTCCCAGC AGCGAACGCA GGAGATGGTG ATCTATCATT TTCTGGCTCG TTATTACGAA TCGCAGCAGG CCCGCAGGTA G
|
Protein sequence | MAIDLANFYL LRVPALAFLS VSTHSEEADA QLKALWEEGT LSEALFVASP SLYQQTIDHL RTTGWPVPPA FRRTLWKYAL RMSTRATPFG IMAGCSVGAI AKATEVTFGK ELRFVPHHRL DMSCIAQLVR ELTNDPLIRP QLRFSPNNSR YIVGDELRYA EHDDNGQERH YFTASVLIST PLEAVLQRAQ SGATSAQLAE TLVAIGITLD AATTFVDQLI EQQLLISELE PMLTGPPMLI QLQSRLREFT GTDAILEVLT AIGSLLASTN TDACTTHQRV LSTLTRHFSP PLSQHLIQTD LFVNTPVNQL NRRVVQTILR QIEQLLPLHR PRPNAQLVSF AQRFRSRYED RTIPLLKALD AEFGVGYGDA VGTESDYSSL LDGLSFVAAS ESNAFTWEAY ENLLVATFSR SLREHQLAVE LTDDDLHSLG TANAPTLPDS FYLFGNLLGT SSMAVDQGDF KFNLLAAQGP SVANLLGRFC AHSRVLTNHV RACLHREEQQ RPDAIFAEII HLPDDRVGNI LQRPVLRRYE IPIVNQASVD ESDQLYLNDL HVSVRTNGRI SLWSERHQKE VIPRLSTAHN YRFGPSIYQF LADLQHQDSS LNIYWDWGPL REQPFLPRIS YRNVILSRAR WLLRSVSLPL GSTDALKSHL RTTYQLPRWI AVADGDNELV LDLDTDLGWQ LLAEEVRRQP TVHLVEWVAT PEQCWLRDDK GAYVNEIVIP CQTLAPSPRH PSPIEQPAFS RLINRQNGAD GCPADEQVMR SFDPGSEWLY VKLYSGVQIA DELLKKMIFP FVQELLTAGT IQNWFFVRYA DPETHLRLRL QCTIPKFYGT ILDRLSEWTA PYRKSGVIYR VQIDTYEREL DRYGAITITE TERLFAADSW AILRYLVQET NSADRWRFAM QSCDSLLADF NVDTREKVNL LRHLQEQFLA EHQADRTLRQ QLNARFRSEH DRIAYDLSGH QSTGNSTTSI LVERSTLLRP CVRDITSKCP SSSIPDLLAS YMHMSLNRLF VSQQRTQEMV IYHFLARYYE SQQARR
|
| |