| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0818 |
|---|
| Symbol | |
|---|
| ID | 8724549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 993138 |
|---|
| End bp | 993980 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003385679 |
|---|
| Protein GI | 284035749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0971009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.428032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG ATACCATCGC CTTGCAGTGT TTTATTGCCG TTGCCGAAAC GGGGAGTTTT
ACCAAAGCCG CCGAGCGAGT AAGTCGCACT CAATCGGCTA TTAGTCAGCA GATAACCAAG
CTGGAATACT TATTGGGAAA GTCGTTGCTT GTGCGGGGTA AAGCCTTTAC GCTGACGCCT
GAGGGAGAAA TTTTTCTAGG CTATGCGCGT CGAATATTTG CGCTTCATCG TGAAGCGCTG
GATCGATTTA AAGATCCTGA TCTCGAAGGA GAAGTACGAT TTGGGCTTCC CGAGAATTTC
GCCAGCGTTT ATTTATCCGA CGTGCTGGCC GATTTTTCCC GTATTCACCC CCGAATCCTG
CTGAATATCG AATGTGATCT GACCCTCAAT CTATTCGATC GTTTCAAGCA GAATGAGTTT
GATCTGGTAC TGGTGAAAAT GAACAGGCCG GAAGACTTTC CCAATGGTTT GGACGTATGG
TCGGAGCCAC TCAAATGGGT AGGTGATGCA AGTTTAATAG ACCCGAAAAA ACCTGTTCCG
CTAGTGCTGG CTCCGCAACC CTGCGTCTAT CGCGCTTCGG CTATTCAGTC CCTACAACAG
GCTGGTCGTG CCTGGCGTCT TGTGTTTTCC AGTCCCAGTT ATACGGGGGC CGTTGCGGCC
GTACGGGCTG GCATGGGCAT TTCAGTAATG CCTCAGACGA TGATCCCGGG GGATTTGCAA
GCTCTGGATG CGGTTTGGCT ACCTAATCTG GCCGATACAC ATGTATCATT GATCAAACAC
ACGGCAAGCA ATCCTGCCAT CAATACGCTG GAGAAATTTG TCCTTCATAA ATTGAAGCAT
TAA
|
|---|
| Protein sequence | MNIDTIALQC FIAVAETGSF TKAAERVSRT QSAISQQITK LEYLLGKSLL VRGKAFTLTP
EGEIFLGYAR RIFALHREAL DRFKDPDLEG EVRFGLPENF ASVYLSDVLA DFSRIHPRIL
LNIECDLTLN LFDRFKQNEF DLVLVKMNRP EDFPNGLDVW SEPLKWVGDA SLIDPKKPVP
LVLAPQPCVY RASAIQSLQQ AGRAWRLVFS SPSYTGAVAA VRAGMGISVM PQTMIPGDLQ
ALDAVWLPNL ADTHVSLIKH TASNPAINTL EKFVLHKLKH
|
|---|
| |