Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0398 |
Symbol | |
ID | 8724126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 501369 |
End bp | 503309 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 1,4-alpha-glucan branching enzyme |
Protein accession | YP_003385261 |
Protein GI | 284035331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.930731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.93639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAACC AACCGGCCTC GTCGGACAAG CCGACCCAAC AGGATGGGGT TTACTCCCGT TTCTCTGATT TCGACATTCA CCTGTTTCGG AGTGGGAAGC ATCAAAAACT ATACGATAAA TTTGGATCTC ATGTCGTTGA GCACAACGGT GTAACAGGCA CCTATTTCGC CGTATGGGCA CCCTCCGCCC GCTATGTAGC GGTTATTGGC AACTTCAACG GCTGGGACAA AGGCAGCCAT TCCATGAATG TTCGCTGGGA TTCGTCGGGC ATTTGGGAGG TGTTCATTCC GAACATCGGC CGGGGCGAAA CCTATAAATA TTTTATCGTC CACGAAGGCG GTCGTGAAGT AGAAAAAGGC GATCCCTACG CCCATTGGTG GGAAGTGCCG CCCAAAACCG CTTCGGTCGT TTGGGATACC TATTACGAAT GGCAGGATCA GGAATGGATG GCTAATCGGG GTGCCAAAAA CGCCCTCAAC GCGCCCATTT CCGTGTACGA AATGCACATG TCCTCCTGGC GACGCGATCC CGGCAATCCG GAGCGCGAGT TGTCCTATGG TGAAATTGCC GACGCGCTGG TGCCTTATCT ACAGGATATG GGCTTTACGC ACGTGGAGTT CATGCCTGTT ATGCAGTATC CGTACGCTCC TTCCTGGGGG TATCAGATTA CCGGATACTA CGCGCCCAGC AGCCGCTTTG GTACACCGCA GGAGTTCATG AAACTCATTG AAAGGCTGCA TCAGGCGGGT ATCGGCGTGT TGCTGGACTG GGTCCCCTCC CACTTCCCCG GCGACGCTCA TGGCCTGTAT GAGTTCGATG GCTCGCATTT ATACGAGCAT CCCGATTTAC GCAAAGGCTA TCACCCCGAC TGGAAAAGCT ACATTTTCAA CTACGGCCGC CCCGAGGTCC GCTCGTTCCT GATCAGCAAT GCCATGTTCT GGCTCGACCG CTGCCACGCT GATGGTCTGC GGGTAGATGC CGTGGCCTCC ATGCTGTATC TGGATTACTC GCGCAATGCG GGTGAGTGGG AGCCGAACGT ATTCGGTGGC CGCGAGAATC TGGAAGTTAT CTCGCTCATT AAAGAAATCA ACGAAGCGGT TTATAAAGAA TTCCCAGATA CGCAAACCAT CGCCGAGGAG TCAACGGCTT TCCCGGGCGT ATCGCGGCCG GTTTTCATGG GTGGACTCGG CTTCGGAATG AAGTGGATGA TGGGCTGGAT GAACGATACA CTCCGGTATT TCCAGCGTGA TCCGGCTTTC CGCAAGTTCC ACCAGGACGA ACTGACGTTC AGTACGGTAT ACGCTTTCAC GGAGAACTTC ATGCTGCCTT TGTCGCACGA TGAAGTTGTT TACGGCAAGC ACTCCCTGAT TGGTAAAATG CCCGGCGACG AATGGCAGCG ATTCGCCAAT TTGCGGCTAC TTTTCTCGTA CATGTTTACC CATTCGGGTA CCAAACTACT CTTCATGGGG GGTGAGTTCG GTCAAACGTC GGAGTGGAAA TTCGATGCCA GCCTGGATTG GCACCTGCTC GAATATGCGC CCCATAAGGG CATGGCAGCC TGCGTAAAAG CCTTAAACAC ACTTTACAAA GCTGAACCTG CCTTGTACGA GCGCAATTTC AGTGCCGAAG GTTTCGAGTG GATCGACACC ACCGACCGCG AAAACAGTGT CATTACGTAC ATTCGTAAAG GCAACCGTCC GGAAGAAAAC TTGCTTATCA TACTGAATAT GACCCCGATT CCACGCTCCG GCTATCGCAT CGGTGTGCCG TCGGCGGGTT CATACAAAGA AGTCTTCAAC AGCGATGCTG TTGAGTTTTT CGGTAGTGGT GTCAGCAATT CGCAGCCTAT TGCCAGCTAC GAACAGGTAT GGCACGGTCG TCCGCAAGCT ATCGACGTAA ACGTTCCTCC TCTGGGAGCT GTCGTTCTAA AAATGATGTA G
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Protein sequence | MTNQPASSDK PTQQDGVYSR FSDFDIHLFR SGKHQKLYDK FGSHVVEHNG VTGTYFAVWA PSARYVAVIG NFNGWDKGSH SMNVRWDSSG IWEVFIPNIG RGETYKYFIV HEGGREVEKG DPYAHWWEVP PKTASVVWDT YYEWQDQEWM ANRGAKNALN APISVYEMHM SSWRRDPGNP ERELSYGEIA DALVPYLQDM GFTHVEFMPV MQYPYAPSWG YQITGYYAPS SRFGTPQEFM KLIERLHQAG IGVLLDWVPS HFPGDAHGLY EFDGSHLYEH PDLRKGYHPD WKSYIFNYGR PEVRSFLISN AMFWLDRCHA DGLRVDAVAS MLYLDYSRNA GEWEPNVFGG RENLEVISLI KEINEAVYKE FPDTQTIAEE STAFPGVSRP VFMGGLGFGM KWMMGWMNDT LRYFQRDPAF RKFHQDELTF STVYAFTENF MLPLSHDEVV YGKHSLIGKM PGDEWQRFAN LRLLFSYMFT HSGTKLLFMG GEFGQTSEWK FDASLDWHLL EYAPHKGMAA CVKALNTLYK AEPALYERNF SAEGFEWIDT TDRENSVITY IRKGNRPEEN LLIILNMTPI PRSGYRIGVP SAGSYKEVFN SDAVEFFGSG VSNSQPIASY EQVWHGRPQA IDVNVPPLGA VVLKMM
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