Gene Slin_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0066 
Symbol 
ID8723794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp83020 
End bp84135 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384938 
Protein GI284035008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA AGGTATCCAT TTTCCTTGCC ATTGTCTGGT TGGCGTGTAT GCTGCCTGCT 
CTGGCGCAAA CGACGGCTGA TTCTACCGCT AGTGTACCGT CAGCGACGCA AGCAGGAATC
ACCTTTACCG GCTATGTCGA AGCGTATTAT ACTCATGATT TTACGGCGCC AAAAACGAGT
CAGGAGCGGC CGGAATTTCT GTACAACCAC AAGCGAAACC GGGAAGTAAA CGTCAATCTG
GCGTTGCTGA AAGGGGCGTA CACCAGCGAG CGCGTCCGCG CCAATCTGGC GGTTCAGGTG
GGCACGTATG CGCAATACAA CTATGCCGCC GAGCAGCCTC TACTCCGGAA TGTCTTTGAA
GCCAATGCGG GCGTGAAGCT GAGCAGAACA AAAGACCTGT GGCTCGATGC CGGTATTTTT
ACGTCGCACA TCGGCTTTGA AAGTGCCATC TCTAAAGACT GCTGGACGTT GACACGGAGC
ATACTGGCCG AAAATTCGCC CTATTACCTG TCAGGGGCCA AACTGACCTA TACTACCGGC
AATGGCAAAT GGACGCTGCT GGGTTCGGTG CTGAATGGCT GGCAGCGGAT TGCCAAACTA
TCGGGTTATT CGGGGCCATC GCTCAGCACT CAGATACAGT ATAAACCGAG TGCCAACTTG
ACGCTGAACT GGAGTACGTT CATCGGCAGC GACCGCCCCG ATTCGTTAAA GCAGCCCCGT
TTTTTCAATA ACTTCTATGC TATCATCAAC CCGAACCGGA AAGTCAGTGC CATTCTCGGC
TTCGATATTG GAACCGACCA GAAGCCGGTT GGAACGGGCA GTTATGTCTG GTATTCCCCG
GTAGCCATTG TCCGATACTC GGTAAGCGAT GCTGTAAAAG TGGCCGGACG AGTTGAATAT
TATGATGATA AGAACGGCGT CATCATCGCT ACCGGAACCC CCAACGGATT CAAAACCTGG
GGCTATTCGC TCAACGTCGA TTACGTCATC CTGCCCAATG CGTTGTTTCG GATTGAAGGA
AAAGTCTATG ACAGCCGGGA TGCCATCTTC GAATCGAAAG TAGGTTTGAG TAAGACAAAT
ACGTCGCTGA CAACGAGTCT GGCGGTGAGT TTTTAA
 
Protein sequence
MKNKVSIFLA IVWLACMLPA LAQTTADSTA SVPSATQAGI TFTGYVEAYY THDFTAPKTS 
QERPEFLYNH KRNREVNVNL ALLKGAYTSE RVRANLAVQV GTYAQYNYAA EQPLLRNVFE
ANAGVKLSRT KDLWLDAGIF TSHIGFESAI SKDCWTLTRS ILAENSPYYL SGAKLTYTTG
NGKWTLLGSV LNGWQRIAKL SGYSGPSLST QIQYKPSANL TLNWSTFIGS DRPDSLKQPR
FFNNFYAIIN PNRKVSAILG FDIGTDQKPV GTGSYVWYSP VAIVRYSVSD AVKVAGRVEY
YDDKNGVIIA TGTPNGFKTW GYSLNVDYVI LPNALFRIEG KVYDSRDAIF ESKVGLSKTN
TSLTTSLAVS F