Gene Sked_37500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_37500 
Symbol 
ID8635383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4192265 
End bp4192942 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003316467 
Protein GI269797012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0213695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCC TGGTGGTGGA CGACGAGGTG CGGCTGGTCG ACGGTGTGCG GCGCGGTCTC 
GAGGCCGAGG GCTTCGCGGT CGACGTGGCG GCGAACGGGG TCGACGGACT GTGGATGGCC
CAGGAGCACC GGTACGACGC GATCGTGCTC GACATCATGA TGCCGGGCAT GAACGGGTAC
ACGGTGTGCG AGCGGCTGCG TGCGGCCGAG GACTGGACGC CGATCCTCAT GCTGACCGCC
AAGGACGGCG AGTGGGACCA GGTCGAGGCT CTCGACACCG GTGCCGACGA CTTCCTCAGC
AAGCCCTTCT CGTACGCGGT CCTCGTGGCG CGGCTGCGCT CCCTGGTGCG CCGGGGCTCC
CGCGAGCGGC CCGTGGTGCT CGAGGCGGGC GACCTGCAGC TCGACCCGGC AGCCCGGAGG
GTGCGTCGCG GTGACGTCGA GATCGAGCTG ACCTCGCGCG AGTTCGCCGT GCTGGAGTTC
CTCATCCGCA ACGCCGGGGA CGTGGTGTCC AAGCGTCAGG TGCTCGACAA CGTGTGGGAC
GGCGACTTCG AGGGTGACCC GAACATCGTC GAGGTGTACG TGCGCCACCT GCGCAACAAG
GTCGACCGGC CCTTCGGGCG CGCGTCGATC GAGACGCTGC GCGGCGCCGG GTACCGGCTG
GCGGTCGGGC GTGGCTGA
 
Protein sequence
MRILVVDDEV RLVDGVRRGL EAEGFAVDVA ANGVDGLWMA QEHRYDAIVL DIMMPGMNGY 
TVCERLRAAE DWTPILMLTA KDGEWDQVEA LDTGADDFLS KPFSYAVLVA RLRSLVRRGS
RERPVVLEAG DLQLDPAARR VRRGDVEIEL TSREFAVLEF LIRNAGDVVS KRQVLDNVWD
GDFEGDPNIV EVYVRHLRNK VDRPFGRASI ETLRGAGYRL AVGRG