| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37170 |
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| Symbol | |
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| ID | 8635350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 4153664 |
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| End bp | 4157044 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_003316434 |
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| Protein GI | 269796979 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.285738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCG AAGAGTCGAG GATCGTCCTC CCCCCAGCGC CCGCCGCCCT CGCCGCCCTC
CCGGTCCGCG CCTGGCGCGA GCCCGTGGTG ATCGACACCT ACGAGCCGGC GGAGGCCAGC
CGTTACCCGG CCTACCTCGA CCAGCGCGTC TACCAGGGGT CGTCGGGCGC CGTCTACCCG
ATGCCCTTCG TCGAGCGGGT CTCCCTCGAC AAGACCCCAC GCACCTGGGA CGCCGTGCAC
ATCGAGAACG ACTACGTGCG CCTCATGCTG CTCCCCGAGC TCGGCGGACG CATCCACGTG
GGCCACGACA AGACCCGCGG CTACGACTTC TTCTACCGCA ACGACGTCAT CAAGCCCGCG
CTCGTCGGGC TCCTCGGCCC GTGGGTGTCG GGCGGCGTCG AGCTCAACTG GCCCCAGCAC
CACCGCCCCG CCACCTACCT GCCCACCGAG TCGACCATCG AGCACGACGA CGACGGCTCC
GTCACCGTGT GGTGCTCCGA CCACGACCCG TTCGCCCGGA TGCAGGGCAT GCACGGTGTG
CGCCTGTCGC CCGCGAGCGC CCTCGTCGAG CTGCGCGCCC ACCTGGTCAA CCGGACCGAC
GACGTCCAGA CCTTCCTGTG GTGGGCCAAC GTCGCGGCAG CGGTGAACGA CGACTACCAG
TCGTTCTTCC CGACGGACGT GCGCGTGGTC GCCGACCACG CCAAGCGCGC GGTGACGAGC
TTCCCAGCGG CCGACGGGCG GTACTACGGC GTCGACTACC CGGCACGCCG CACGCCAGAG
CGGCCCGACG GCGACAGGCT CGACTGGTAC CGGAACATCC CCGTGCCCAC CTCGTACATG
TGCCTGGGGT CGCAGGACGA CTTCTTCGGC GGGTACGACC ACGGGGTCGG CGCCGGGTTC
GTGCACTGGG CCGACCACCG GGTCTCGCCG GGCAAGAAGA TGTGGACCTG GGGCGACGCG
CCCTTCGGGC ACGCGTGGGG CGCGCACCTC ACCGACACCA ACGGCCCCTA CGTCGAGCTC
ATGGCCGGGG TGTTCACGGA CAACCAGCCG GACTTCGCCT TCCTGCGCCC CGGCGAGACC
AAGACCTTCT CCCAGTACTG GTACCCGATC CAGGACACCG GCCCCGTGCA CCAGGCCACG
CGTGACGCGG CGGTCCGGCT GGACGTCGAG CCGGTGGGCG ACGGTGCCGA GGTCCGTGTC
GCGGTCGCGG TGACGGCCGA GCGCCCCGGT GCGCGGGTCG TACTGCGTCG CGGGGCGGAG
GTGGTGCACA GCGCGGACGT CGACCTGGCG CCGGGAGCGC CGTACGTCGT CGGCGTCACG
GTCCACCCCG AGGATGGCGC CGTCGCGGGG GAGGTCGACC CCCGTGACCT CGAGCTCACG
GTCGAGCACG GTGGCGCGCG CCTGATCACC TGGCGCCCCC GCACGACGAC GGACGACGCA
CCGGAGGCGA GCGCGCGGTC GGGGCAGCAG GAAAGCCAGC GCGACGTCCG GCCCGCGACC
GAGCCTCCAC CGCCCGAGCA GCTGGGCTCC GTCGACGAGC TGTACGTGAC CGGCCTGCAC
CTCGACCAGT ACCGGCACGC GACCCGCTCG CCCGAGGCCT ACTGGGTCGA GGCCCTGCGC
CGCGACCCCG GCGACGCGCG CACCCACGTG GCGCTCGCGG CCCGCCGGGC GCGCGACGGC
CGGCTCGACG ACGCCGAGCG GCACCTGCGT GCCGCCGTCC GGCGGCTCAC CCTGCGCAAC
CCCAACCCGC GCGACGGCGA GGCGCACTAC CGCCTAGGGG TCGTGCTCGC CCGTCAGGGA
CGCGTCGTCG AGGCGCGCGA GGCCCTCGGC ACGGCGTCGT GGGACCGGTC GTGGCTCGAC
GCCGCCGTCG TCGCCACGGC GCGGCTCGAC CTCGCGGAGC GCCTCGAGGA CGCCGTCGAC
GACCTGCAGG CGCTCGTCAC CCGCGCACCC GGACACGTCC AGGCCCGCAA CCTCCTCACC
GTCGCGCTGC GCCGCGCCGG TGACGAGGCC GCAGCCCGTG AGACCGTGCG CGGCACCCTC
GCGCTCGACC CGCTCGACGC CTGGGGACGC GACCTCGGCG ACCGCCTGGG CGAGCACGTG
ACGCTCTCCG CCGACCCGAC GGTCCTCGTC GACGTCGCGC TCGAGCACGC CTCCACCGGT
GACGTCGACG CGGCGCTCGC GCTGCTCGAG CGGGCCGCGT CCCTGCCGAC GGTCGGGGGT
CAGCGCAACG TCGCACCGGT CGCGTGGCTG CACGCCGCGG ACCTGGAGCT CTCCCGCGGG
GACCACGCCG CCGCCGACCG GGCGGTCGAG CGTGCCCGCC TCGCCCCCCG GGACCGGTGC
TTCCCGTCTG CCGCCGAGGA CGACGCGCTG GCACGCCTGC GCCGCTACCG CCCGGACGAC
CCGCTGCTGT CGGGCCTCGC GGGCCACCGC CTCTACGCCG CCGGTCGACG CGACGAGGCC
GTCTCCGCGT GGCAGGCCTC GGCCGACGCC GACGGCACCG ACCCCGTCGT CCTGCGCAAC
CTCGGCCTGG CCGCGTACAA CGTGCTCGAC GACGGCGACC TCGCGGCCCG CTGCTACGAC
CAGGCCAGGG CCCTCGCCCC GGACGACGCC CGCCTGCTCT ACGAGGCGGA CCAGCTCGCG
GGGCGCAGAG GCGTCGGGCC GGCCGAGCGT GCCGCGGCGC TCTCCGCCCG GGCCGACCTC
GTCGCGGCCC GGGACGACCT CACCGTCCAG CTCGCCGTCC TGCTCACCGA CCTCGACCGG
GCGGACGAGG CCCTCGCGCT GCTGACCGGG CGCTCCTTCC AGCCGTGGGA GGGCGGCGAG
GGTTCCGTCC TGGCCGCCTG GGACTCCGCG CACGGGTCGC TCGCGCTCGC GGCCCTCGAC
GCCGGTCACC CCGACGACGC CGTCAGGCAC GTCCAGGCCG CGCTCGAGCC GGTCGCGTCC
CTCGGCGAGG CACGGCACCC GCTGGCCAAC ACCGCCGACC TGCACCTGCT GCTCGGCGAC
GCGCTGGCAG CGGCCGGGCG CGAGCACGAG GCTAGCGAGG CGTGGGAGAT CGCCGCGGCG
CAGCAGGGGG ACTTCGAGGC GATGGCGGTC CAGCCGTACT CGGAGCGCAC CGCGGCGTCG
GTCACGGCCC TGCGACGTCT CGGTCTGCAC GACGAGGCCA CCGACCTGCG CGACGGCCTC
GCCCGGTACG TCGACGAGCA GGAGGGGACG ACGGCTGCCG TCGACTACTT CGCGACCTCG
CTGCCGACGA TGCTGCTGTT CGCCGAGGAC GTCCAGGCCA CCCACGACGC GCGCCCCCGG
CTGCTCCGGG GCCAGCTCGG ACGCCTCGAC GAGCAGGAGC CGCTGCCGTC GTCCCAGAGC
ACCCGCAGGA CTGACCGATG A
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| Protein sequence | MLSEESRIVL PPAPAALAAL PVRAWREPVV IDTYEPAEAS RYPAYLDQRV YQGSSGAVYP
MPFVERVSLD KTPRTWDAVH IENDYVRLML LPELGGRIHV GHDKTRGYDF FYRNDVIKPA
LVGLLGPWVS GGVELNWPQH HRPATYLPTE STIEHDDDGS VTVWCSDHDP FARMQGMHGV
RLSPASALVE LRAHLVNRTD DVQTFLWWAN VAAAVNDDYQ SFFPTDVRVV ADHAKRAVTS
FPAADGRYYG VDYPARRTPE RPDGDRLDWY RNIPVPTSYM CLGSQDDFFG GYDHGVGAGF
VHWADHRVSP GKKMWTWGDA PFGHAWGAHL TDTNGPYVEL MAGVFTDNQP DFAFLRPGET
KTFSQYWYPI QDTGPVHQAT RDAAVRLDVE PVGDGAEVRV AVAVTAERPG ARVVLRRGAE
VVHSADVDLA PGAPYVVGVT VHPEDGAVAG EVDPRDLELT VEHGGARLIT WRPRTTTDDA
PEASARSGQQ ESQRDVRPAT EPPPPEQLGS VDELYVTGLH LDQYRHATRS PEAYWVEALR
RDPGDARTHV ALAARRARDG RLDDAERHLR AAVRRLTLRN PNPRDGEAHY RLGVVLARQG
RVVEAREALG TASWDRSWLD AAVVATARLD LAERLEDAVD DLQALVTRAP GHVQARNLLT
VALRRAGDEA AARETVRGTL ALDPLDAWGR DLGDRLGEHV TLSADPTVLV DVALEHASTG
DVDAALALLE RAASLPTVGG QRNVAPVAWL HAADLELSRG DHAAADRAVE RARLAPRDRC
FPSAAEDDAL ARLRRYRPDD PLLSGLAGHR LYAAGRRDEA VSAWQASADA DGTDPVVLRN
LGLAAYNVLD DGDLAARCYD QARALAPDDA RLLYEADQLA GRRGVGPAER AAALSARADL
VAARDDLTVQ LAVLLTDLDR ADEALALLTG RSFQPWEGGE GSVLAAWDSA HGSLALAALD
AGHPDDAVRH VQAALEPVAS LGEARHPLAN TADLHLLLGD ALAAAGREHE ASEAWEIAAA
QQGDFEAMAV QPYSERTAAS VTALRRLGLH DEATDLRDGL ARYVDEQEGT TAAVDYFATS
LPTMLLFAED VQATHDARPR LLRGQLGRLD EQEPLPSSQS TRRTDR
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