Gene Sked_29090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29090 
Symbol 
ID8634543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3246548 
End bp3247195 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID 
ProductProtein of unknown function (DUF1684) 
Protein accessionYP_003315645 
Protein GI269796190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.941237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG CAGCCGACAG CGTGCTGGCC GTCGCCGACT GGCGACGCAG GACCGCCGCG 
ACGTACGCGC ACGTCCGGGA GCTCGCGGTC GACGACCCGG CGGCGGCGCA CGCCGCCTGG
GTGCGCGACC GCGACGAGAT GTTCGCGACG CACCCGGCCT CAGCCCTCGG TGATGCCGGC
CGAGCGAGCT TCACCGGGCT CGACGTGGCT CCCTACGACC CGGCGTTCCG CTTCGAGGTC
GAGGTGCAGC CCGCTCCCGA GGGCCGGCTC GACGTCGCGA CGGGCACCGA CGGCGTCGTC
CCCTTCGAGC GGGTCGGCCT CGTCGAGCTC GACGGACTGG GAACCCTCGG GCTCTGGGCG
CTGCGCTCGT ACGGCGGGGG TCTGTTCGTC CCGCTCAAGG ACTCCAGCGC CGGGCAGGCG
GGCGGCACCT ACGGCGGCGG GCGCTACCTG CTCGACACGA TCAAGGGTGC CGACCTCGGC
CAGACCGCAG GAGGTCGGCT CGTGCTCGAC CTCAACTTCG CCTACAACCC CTCGTGCGCC
TACGACCCGG CCTGGGCCTG TCCGCTCGCC CCGCCCGACA ACACGCTCGC CGTCCCGCTG
CCCGTGGGGG AGCGGGCGCC GGAGAAGCAC CTGGTCGCGG AGCTCTGA
 
Protein sequence
MTPAADSVLA VADWRRRTAA TYAHVRELAV DDPAAAHAAW VRDRDEMFAT HPASALGDAG 
RASFTGLDVA PYDPAFRFEV EVQPAPEGRL DVATGTDGVV PFERVGLVEL DGLGTLGLWA
LRSYGGGLFV PLKDSSAGQA GGTYGGGRYL LDTIKGADLG QTAGGRLVLD LNFAYNPSCA
YDPAWACPLA PPDNTLAVPL PVGERAPEKH LVAEL