Gene Sked_28890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28890 
Symbol 
ID8634523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3227380 
End bp3228237 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315625 
Protein GI269796170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.998422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCCCGACCGT CCAGGTCATC TCTCGCGACG GGTGTCAGCC CTGTGTCGCG 
ACGCACCGCC GGCTCGCGAA GTTGCAGGTC GACTACACCT CGGTCGATGC GTCTGACGAG
ACCGCGATCG CTCAGGCCCG CGAGCTGGGT CACCTCGAAC TGCCCGTCGT CATCGTCTCC
GACGAGACCG GCGTCATCGA CTCCTGGGCT GGCTTCAGCC CAGACCGGCT TTCAGCACTC
GCTGCCAGCC ACACCCCGAA GAAGGAGCAC CGCATGTCAG AGAACAACAC CCCCGAAGCA
ACCGCCGCCA CGCGGACCAT CACGGTCGAC GGCATGCAGA TCGAACTCAT CGGTCGGGAG
AGCATCCTCG ACCGTGGTGA GGCTGGCCTG CGTGCCGGGT GGGAGGCCGA CAAGGCTGCC
CGCCAGGCCG ACGAGCCCGA GGAAGACGAG GACGCTGAGG AGGCGTACGA GGCCCTCGTT
GAGCTCGTTG CCGAGGTCGC TGTCGGCTAC ACGGTCGAGC GGGCCGCCAT CGCCTCCGGT
CAGGAGCAGG TCAGCGTCAC CGACCCTGAG GCGCGGGAGT CCATCACCAC GACGGTGAAG
ATCTCCGACG AGACCGGGAA GCCCTTCAGC CCCGAGGCGC TGCGCGCCTC GCTGCCGACG
CAGCTGCGGG AGATCCAGGG CCTGGCCGAC TGGATCGAGC ACGTCTTCGA GGACGACGAC
ACCGACTACT CGGACCCGTC CCCGCACGGG TTCGACGACC AGTACACGGC GGACCGAGAG
TTCTACTACG GCCAGGACGA CATCCTCGCC CGACACAACG CGCTCGAAGC GCGCCTCGCG
CAGATCTCCG CCGAGTAA
 
Protein sequence
MSAAPTVQVI SRDGCQPCVA THRRLAKLQV DYTSVDASDE TAIAQARELG HLELPVVIVS 
DETGVIDSWA GFSPDRLSAL AASHTPKKEH RMSENNTPEA TAATRTITVD GMQIELIGRE
SILDRGEAGL RAGWEADKAA RQADEPEEDE DAEEAYEALV ELVAEVAVGY TVERAAIASG
QEQVSVTDPE ARESITTTVK ISDETGKPFS PEALRASLPT QLREIQGLAD WIEHVFEDDD
TDYSDPSPHG FDDQYTADRE FYYGQDDILA RHNALEARLA QISAE