| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_23530 |
|---|
| Symbol | |
|---|
| ID | 8633988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2620681 |
|---|
| End bp | 2621997 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | predicted membrane-associated Zn-dependent protease |
|---|
| Protein accession | YP_003315102 |
|---|
| Protein GI | 269795647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.062078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTACC TCGTGGGCGT GCTCGTCATC CTCGCCGGGC TCCTCGTCTC GATCGCCCTC
CACGAGGTCG GCCACATGGT CCCGGCCAAG AGGTTCGGCG TCCGCGTCAG CCAGTACATG
GTCGGCTTCG GCCCGACGCT GTGGTCCCGC ACGCGGGGCG AGACGGAGTA CGGGCTCAAG
GCCATCCCGC TCGGCGGGTA CGTGCGCCTC GTCGGCATGT ACCCCCCGGG GGACCCGCGT
GCCGAGCGGA AGACGGGGCG CATCGCCGAG CTCGTCCAGT CGGCGCGCGA CGCGAGCGCG
GAGGAGATCG TCCCGGGGGA GGAGCACCGG GCCTTCTACA ACCTCTCGGC CCCGAAGAAG
CTCGTCGTCA TGCTCGGCGG GCCGTTCATG AACCTCGTGA TCGCCGCGGT GCTCTTCACC
GTCGTCGTGG TCGGCTTCGG TGCCTTCGGC CCGACGACCA CGCTGGCGTC GGTGTCCCAG
TGCGTCCTGC CCGTGGGTGC CCCGGCCGAC GCCGAGTGCA CCGAGGGCTC AGAGCTGGCC
CCGGCAGCGG CTGCGGGGCT GCTCCCGGGA GACACCATCG TCGAGTTCGG GGGGGTGGCC
ACGACCGGAT GGGACGAGCT GGCCGCGCAG ATCAGCGCCG CGGGCGGTAC GCCCACGGAG
GTGGTCGTCG AGCGTGACGG CCAGCGGGTC GAGTCGGTCG TCACCCCTGT CGTCGCAGAC
CGCCCCACCA CGGACGCGTC CGGCGCCGCG GTGCTCGACA GCGACGGGGA GCCGGTGACC
CGGAGCGTCG GCTTCCTCGG GATCAGCCCC ACGCAGGGTC TCGAGCCGCA GCCGGTGACC
GTCGTCCCGG GCATGCTCTG GGACCGGCTC GTCCAGACCG CACAGGTGAT CGTCACCCTC
CCCGAGCGCA TGGTCGACAT CACCCAGGTC GCCTTCGGCC TCGAGGAGCG CGACCCGACC
TCCGTCGTGG GCCCCGTGGG CGTGGGACGG TTCGCGGGTG AGATCGCGTC GGTGCAGATC
GACGGGTACG ACACCGCGCT GCGCACCGCG GACCTCATCA TGATGGTCGC GGGGCTCAAC
ATCGCGCTGT TCGCCTTCAA CCTCATCCCG CTGCTCCCGC TCGACGGGGG CCACGTCGTG
GGTGCCCTGT ACGAGGGGGC GCGCCGCCAG GTGGCGCGGG TCCGGGGCCG CCCGCGCCCG
GCGCCTGCGG ACACCGCCCG CATGATGCCG CTCGCCTACG GCGTGTTCGT GGTCATGGCG
GCGATGGGCG CGCTCATCGC GTACGTCGAC GTCGTCAGAC CCGTCCAGCT CATGTGA
|
|---|
| Protein sequence | MSYLVGVLVI LAGLLVSIAL HEVGHMVPAK RFGVRVSQYM VGFGPTLWSR TRGETEYGLK
AIPLGGYVRL VGMYPPGDPR AERKTGRIAE LVQSARDASA EEIVPGEEHR AFYNLSAPKK
LVVMLGGPFM NLVIAAVLFT VVVVGFGAFG PTTTLASVSQ CVLPVGAPAD AECTEGSELA
PAAAAGLLPG DTIVEFGGVA TTGWDELAAQ ISAAGGTPTE VVVERDGQRV ESVVTPVVAD
RPTTDASGAA VLDSDGEPVT RSVGFLGISP TQGLEPQPVT VVPGMLWDRL VQTAQVIVTL
PERMVDITQV AFGLEERDPT SVVGPVGVGR FAGEIASVQI DGYDTALRTA DLIMMVAGLN
IALFAFNLIP LLPLDGGHVV GALYEGARRQ VARVRGRPRP APADTARMMP LAYGVFVVMA
AMGALIAYVD VVRPVQLM
|
|---|
| |