| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11780 |
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| Symbol | |
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| ID | 8632814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 1362427 |
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| End bp | 1365870 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | lysyl-tRNA synthetase (class II) |
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| Protein accession | YP_003313955 |
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| Protein GI | 269794500 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.105343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACACC CGGCGACCGA CCTGACCGAC GACCCGGCCG CGCCCGTCGC GCACGGTGCG
AGCAGCGTGC TGGGGGCCAC GCCGCCGAGC ACGTCGACCA CCACCGCGCC GCCCACCGCT
CCCCGTGCCC CGTCAGAGCC GGTCACGCCC GGACGTCCCT GGGCCCGCAC CGTCGCCAGG
CTCACCGGGC GCGTCGTCCA GGCAGTCGCG ATCTGGCTGC TCGTCGGGCT GCTGCTCCTG
CCCTTCGCCC CGGGCGTCGT CCACGACGTC GGCCGGTGGC TGTCGGTCCT CAACGTCCCG
AGCCAGCCGA GCTTCTTCAC GGTGATCCTC GTGGGGGTCG TGGCCTCGGG CCTGCTGCGC
CGGCTCCGTG CCGCGCTGTG GTTCGTGATC CTCGCGTGGC AGGTGCCGCC GATGCTGCTC
GCCGTCCTCA CCGCGCTGGT CGTCGGGACC CGGCAGTCGA CGCTCGCCGA GCTCGAGGTC
CCGCCGGTCG ACCTCGTCGC GGGCGTCGTG GCCCTCGTCG CCATCCCCGT CCTGGTGCTC
TCCCGCGAGG CCTTCCCCGC CCGCCTGCGG CCGCGCGCGT GGCGCGGCGC AGTCCTGGTG
ATGCTCACCG GCGCGGTCGT GAGCACGGTC GTCGCGATGT CGCTCCTCCA GGTCGTCACG
CACTCCCTCA GCGGACCGGC GGAGCGCCTG CGGTGGAGCC TCGCGAACGC TGTCGGCATC
CACGTCGCGA CGTCGCCCGC CGACCCGAGC GTCCCCGCGT GGGTCGCGGT CGTGGCGAGC
GTGTTCTCCG CCGCCGGGCT GCTGCTCGGC ATCGCCGTGT TCCTCCGATC AGCCGCGGGT
GACCCCCGAC GCCGCTCGGA CGACGCGCTC GCCGTGCGAC GCCTGCTCCT CACCTACCCG
TCGGCCGACT CCCTCGAGTA CTTCGCGACG CGTGACGACA GGTCGGCGGT CCTGTCGGCC
GACGGCGAAG CCGCCGTGTC CTACCGGGTG GTCTCGGGCG TGAGCCTCGC GGCCGGCGAC
CCGGTGGGTG ACCCCGCCTC GTGGCCCGAC GCCGTGGCCC GCTGGCTCGA CCACACCCGC
GCGCACGGGT GGATCCCCGC CGTCACCTCG GCCACGCCCG CCGGCGCACG CACCTACCGC
GACGCCGGCC TGCACCCGCT GCCCATGGGC GACGAGGCGG TCGTCGAGAC GCGCCGGTTC
GACCTGTCGA ACCCGGCGAT GCGCCCGGTC CGGCGCAGCG TCGAGCGTGG GAAGACGGCC
GGGTACACGG TGCGCGTCCG CCGGCAGTCT GCCGTCGCCC CGGCCGAGCT CGCCGGGCTC
GTCGAGCTCG CCGAGACGTG GCGGCACGGC GACGAGCGCG GGTACTCCAT GGCCCTCGAC
CGGCTCGGGT CGCCCGTCGA CCCACGCGAG GTGGTCGTCA CCGCGCACGA CGCCGACGGG
ACGTGCCAGG GGCTGCTGTC CTTCGTCCCG TGGGGACGGC GGGGGCTCTC GCTCGACGTG
ATGCGCCGGT CTCCCGACGC GGTCTCCGGA GTCACCGAGA TCATGGTCGC GGGCCTGGTC
GGCTCCTCCC GCGAGCTCGG CGTCGAGGAG GTGTCCATGA ACTTCGCGAT GTTCCGGGAG
ACCTTCGAGC TCGGCGAGCG CATCGGTGCC ACGCCGTTCC AGCGCCTCAA CCGTCGCGTG
CTGCTCCTCG CGTCCCGGTA CTGGCAGCTC GAGCAGCTGT ACCGGTCCAA CGAGAAGTAC
CTGCCCGACT GGCGTCCGCG CCTGCTCTGC TACGAGGCCA CCAGCCAGCT GACGCGCGTG
ATCTTCGCCC TCGGGCAGGC CGAGGGCTTC CTGCCCCGCA ACCCCCGCTG GTTCGCCGGC
ACGGACGAGC GCGAGGACGA GCCGAGCCTG AGCAGCCCCG AGCAGGCTGC CGAGGTCGTC
GCGCAGGAGA CCGCGCTGCT CGCGGTCGCC GGACCGGAGC GCCGCCTCAC CGAGCAGCAG
CGCAACCGGC ACCGCAGGCT CGACGTGCTG CGCGCCGCCG GCATGGACCC CTACCCGGTG
GCGGTCCCCC GCAGCTGCAC GGTGGGCGAG GCGAGGGCCC TGGCAGTGCA GGTCGGGACG
AGCCCCGAGA CCGGGCCGGC GACGGAGCAG GTCGAGGTCG TGGGGCGCGT GGTGCGCCTG
CGCGACCTCG GCGGCGTGCT GTTCGCCGTC CTGCGCGAGG GCACCGACCA GGTGCAGGCG
ATGCTCACGG CCGACGGGAG CGCCGACGTC GCGCTCTGGC GTCGCGCCGT CGACCTCGGC
GACCAGGTCG GGGTCAGCGG GACCGTGACC CGCAGCCGCA GCGGCGAGCC GACGGTCCAG
GTGACCTCCT GGCGGATGGC CGCGAAGGCG CTCACGCCGC CCCCGGACAA GCACCGCGGG
CTCGTCGACC CGGAGACGCG ACTGCGACTG CGCCACATGG ACCTGGCCCT CGACGACCGC
GCCCAGCAGC TGCTGCGCGC CCGGTCGGCC GCGGTGTGGT CGATGCGCAG CACGCTGGTC
GGCCGCGACT TCCTCGAGGT CGAGACCCCG ATCCTGCAGC GGATCCACGG TGGCGCCAAC
GCGCGCCCCT TCACCACGCA CATCAACGCG TACGACATGG ACCTGTACCT GCGGATCGCC
CCCGAGCTCT ACCTGAAGCA GCTCATGGTC GGTGGTGCGG GGCGGGTGTT CGAGCTCGGG
CGCAACTTCC GCAACGAGGG CGTCGACAGC ACGCACAACC CCGAGTTCAC CTCGGTCGAG
GCCTACGAGG CCTTCGGCGA CTACCTCACC ATGCGCGACC TCACCCGTGA CCTCGTCGTG
GCCGCGGCGG TCGCCGTGCA CGGCGAGCCG GTCTCCCGCA GGGCCGACGG CACCGTGGTC
CGTCTCGACG AGCCGTGGCC GAGCATCACG GTGCACGACG CGGTCTCCCG CGCCGTCGGG
GTCGAGGTCA CCCCTGACCT CCCGCTGGCC GACCTGCGCA AGGTCTGCGA CTCCCACGAC
GTCGCCTGGG ACGCCCAGGA GACCCACGGG GCGCTCGTCA CCGAGCTGTA CGACAGGTTC
GTCGAGGGGC AGACCGAGCG GCCGACCTTC TACATGGACT TCCCCGTGGA GACCTCCCCG
CTGACCCGCC AGCACCGGCG CGACCCGCGC CTGGCCGAGC GGTGGGACCT CGTGGCCTTC
GGCGCCGAGC TCGGCACCGC GTACTCCGAG CTCGTCGACC CGGTCGAGCA GCGGGCCCGG
CTGACCCAGC AGTCGATCCT CGCGGCGGCG GGCGACCCCG AGGCCATGGA GGTCGACGAG
GGCTTCCTCT CCGCCCTCGA GTTCGCCATG CCGCCGACCG GTGGTCTCGG CATCGGTGTG
GACCGGGTGG TGATGATGCT CGTGGGCGCC TCGATCCGCG ACACCCTGAC CTTCCCGTTC
ATCCGTCCGA CCGGTCGGGC CTGA
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| Protein sequence | MRHPATDLTD DPAAPVAHGA SSVLGATPPS TSTTTAPPTA PRAPSEPVTP GRPWARTVAR
LTGRVVQAVA IWLLVGLLLL PFAPGVVHDV GRWLSVLNVP SQPSFFTVIL VGVVASGLLR
RLRAALWFVI LAWQVPPMLL AVLTALVVGT RQSTLAELEV PPVDLVAGVV ALVAIPVLVL
SREAFPARLR PRAWRGAVLV MLTGAVVSTV VAMSLLQVVT HSLSGPAERL RWSLANAVGI
HVATSPADPS VPAWVAVVAS VFSAAGLLLG IAVFLRSAAG DPRRRSDDAL AVRRLLLTYP
SADSLEYFAT RDDRSAVLSA DGEAAVSYRV VSGVSLAAGD PVGDPASWPD AVARWLDHTR
AHGWIPAVTS ATPAGARTYR DAGLHPLPMG DEAVVETRRF DLSNPAMRPV RRSVERGKTA
GYTVRVRRQS AVAPAELAGL VELAETWRHG DERGYSMALD RLGSPVDPRE VVVTAHDADG
TCQGLLSFVP WGRRGLSLDV MRRSPDAVSG VTEIMVAGLV GSSRELGVEE VSMNFAMFRE
TFELGERIGA TPFQRLNRRV LLLASRYWQL EQLYRSNEKY LPDWRPRLLC YEATSQLTRV
IFALGQAEGF LPRNPRWFAG TDEREDEPSL SSPEQAAEVV AQETALLAVA GPERRLTEQQ
RNRHRRLDVL RAAGMDPYPV AVPRSCTVGE ARALAVQVGT SPETGPATEQ VEVVGRVVRL
RDLGGVLFAV LREGTDQVQA MLTADGSADV ALWRRAVDLG DQVGVSGTVT RSRSGEPTVQ
VTSWRMAAKA LTPPPDKHRG LVDPETRLRL RHMDLALDDR AQQLLRARSA AVWSMRSTLV
GRDFLEVETP ILQRIHGGAN ARPFTTHINA YDMDLYLRIA PELYLKQLMV GGAGRVFELG
RNFRNEGVDS THNPEFTSVE AYEAFGDYLT MRDLTRDLVV AAAVAVHGEP VSRRADGTVV
RLDEPWPSIT VHDAVSRAVG VEVTPDLPLA DLRKVCDSHD VAWDAQETHG ALVTELYDRF
VEGQTERPTF YMDFPVETSP LTRQHRRDPR LAERWDLVAF GAELGTAYSE LVDPVEQRAR
LTQQSILAAA GDPEAMEVDE GFLSALEFAM PPTGGLGIGV DRVVMMLVGA SIRDTLTFPF
IRPTGRA
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