| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08410 |
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| Symbol | |
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| ID | 8632477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 954190 |
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| End bp | 955329 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | carbohydrate ABC transporter membrane protein |
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| Protein accession | YP_003313626 |
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| Protein GI | 269794171 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.166742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCC TGTCCCCACC CAAGCCCTCG ACCGACGAGG AGCGCACACC CCGTCGGATC
GCCTTCCGCC AGCAGCGTGG CAAGTGGGAT GTGAAGCTCT CCCCCTACCT GTACATCTCG
CCGTTCTTCG TGCTCTTCGC GATCACCGGC CTCTTCCCGC TGGTGTACAC CGCCTGGGTG
TCGATCCACG ACTGGAACCT GCTCATCGGG CAGGGCGAGA TGGTGGGCCT CAAGAACTAC
GCGGACGTGC TCCAGCAGCC GAACTTCTGG AAGGCGCTGC GCAACACCTT CTCGATCTTC
CTGCTCTCGT CCGTCCCGCA GGTGATGATC GCGATCGTGC TCGCGGCCCT CCTCGACGCC
AACATCCGCG CCCGCACCTT CTGGCGCATG GGCGTGCTGC TGCCCTACGT GGTCGCCCCC
GTCGCCGTCG GCCTCATCTT CGGCCGCCTG TTCGCCGACC AGTCCGGCAC GATCAACGCC
GTCCTCGACA TCTTCGGCAT GGACCCGGTC CGCTGGCACG CCGAGATCCT GCCCAGCCAC
TTCGCGATCG CGACCATGGT GAACTTCCGC TGGACGGGCT ACAACACCCT CATCTTCCTG
GCCGCCATGC AGGCGGTCCC CCGCGAGCTC TACGAGGCCG CGATCATCGA CGGGGCCGGC
CGCCTGCGCC AGTTCTTCTC GATCACCGTG CCGCAGCTGC GCGCCACCAT CATCTTCGTC
GTCATCACCT CGACCATCGG CGGTCTGCAG ATCTTCGACG AGCCCCGGAT GTTCGACCCC
TCGGGAATGG GCGGCGCCGA CCGGCAGTGG ATGACGCTCA CCATGTACAT CTACGAGCTC
GGCTGGGGCA ACCAGAAGAG CTTCGGCCGC GCCGCAGCGG TCGCGTGGAT CCTCTTCGTC
ATCATCGTCG TCATCGGGAT CATCAACTTC CTCATCACCC GGCGCATCTC GTCGTCCGGG
GCGAGGGCCG TGAAGCGCTC GGCCAAGAAG GCCCTGCTCG ACGCGCCGCA GACTCCCCCG
GCGCCCGCCG CGCCGCTGAG CCCCACCGGG GTCGCGGCAC CGGCAGCACC GCCGACGACG
ACGTACCACC CAGACGACCT GCCGGACGAC GGCACCACGA CCACCGGGAG CACGCGATGA
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| Protein sequence | MAVLSPPKPS TDEERTPRRI AFRQQRGKWD VKLSPYLYIS PFFVLFAITG LFPLVYTAWV
SIHDWNLLIG QGEMVGLKNY ADVLQQPNFW KALRNTFSIF LLSSVPQVMI AIVLAALLDA
NIRARTFWRM GVLLPYVVAP VAVGLIFGRL FADQSGTINA VLDIFGMDPV RWHAEILPSH
FAIATMVNFR WTGYNTLIFL AAMQAVPREL YEAAIIDGAG RLRQFFSITV PQLRATIIFV
VITSTIGGLQ IFDEPRMFDP SGMGGADRQW MTLTMYIYEL GWGNQKSFGR AAAVAWILFV
IIVVIGIINF LITRRISSSG ARAVKRSAKK ALLDAPQTPP APAAPLSPTG VAAPAAPPTT
TYHPDDLPDD GTTTTGSTR
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