Gene Sked_05600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05600 
Symbol 
ID8632197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp624692 
End bp626200 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content77% 
IMG OID 
ProductFHA domain-containing protein 
Protein accessionYP_003313354 
Protein GI269793899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.3344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC CCGTCTACAC GCACGGCGAC TGGGTCGCGA TCATCACCGA CGGCGCCGTC 
GCCCTGCTGC CGCCCAGCAT CGACGAGGCC CGTCTCACCC AGGTCTGGGA TGCGCTCCGC
GAGAGCGCCG ACCTCACCCA CTCCCTCACC GTCCTGGCCC GGGGCGGGCT CGTCGGGCTG
CCGCCCTTCG CCCTGGTGTC CGTGGTCGAC GGGCACGTCC GCGGGTTCCT GCGCGGCGAC
GTCCGCCTCC TCACGGCCGA CGCCCACGGG ACGAGCGAGC ACTCCGCCGC GCACGTGGCC
ACCTGGGCCG AGATCAACGT CGCCGACGCC GGCGCAGTGA CAGTCGCGGT GCCCGCGAGC
GTCGCCCCCG TGGTCGACGG GGTGCGGATG CCGGCCCTCG CCGCTGTGGT CCGCGCGTCG
AGCGTCGAGG TCCGCCTCCG CGACGCCGTC GCGGCGCCCC GACCTGCCCC CGTGGTCGAG
GAGCCGGCCC CTGTCGTGGC GCTCTCCGAG ACCACCACGC GCGACGGCCT CGAGGCCGAC
CTCGCCGACG GGCACCGCAG CACCGACGAC GAGAACCGTC CCGGGGCCCC GTCACGCCGC
GCAGCCCGCC GGGCGCTCGC CGCGGAGCAC CCGGCCGAGC CCGTCGTCGC GCCGCAGCCG
AGCCCCGACC CGGTGCGCGA CGCCGAGCGT GCGCGCGAGT ACGTCGCCCG CCGGGCCCGA
GCACGCGCCA CGGCGGCGGG GAGCCCTGCC TCGGGCTACG CCGCCAGCGC GAGCGGCTCG
ACGAGCACCT CGACGGGCGT CGTGCCTGAC GCCGTGCCGA GCCCCTCGGC GCGGGTTCCC
GACGTCGCAC CCGTGGCCCG CCGCGCGGCG ACCGCGCAGC CCAGCACCTC CCACGCGGCG
AGCGCGCACC CCGTCGTCAC GCGGGCCAGC GCGGCCGTGC CGCCGCCGCC GGTCGACACC
CCGGTCGGCG AGATGACCGT CGTGCCCGCA GCCGAGCCGG AGCCCCTGCC GCTCGAGCTC
ACCGGTCCCG ACGTCGAGGC GCTCCTCGGC GACGACGACA GGTTCGGCAG CACGGTGCTC
TCGACGAGCC TCGTCGAGAT CCGCCGCCAG ATGTCCGGGC GCGAGGCCGG GGCTCTCCCC
GGTCCGTTCC CCGTGCCTGC CGTCCCGCGG GTGCACAAGA TCCGCATGTC CTCCGGCCTG
CTCGTGCCGC TCGACCGTGC CGTGCTCATC GGCAGGGCCC CGGTCGTCTC GCGCGTCGCG
GCCCGCGACC TCCCGCGCCT GGTCACGGTG GTGAGCCCCA ACCAGGACAT CTCGCGGACC
CACGCCCAGG TACACACCGT CGGCGAGGAC GTCCTCGTGA CCGACCTCAA CTCGACCAAC
GGCATGCTCC TCACCGAGGT GGGCCAGGCA CCCCGCCGCC TGCGCTCGGG CGAGCCCACC
CCGATCACCC CGGGGGCCCT CGTCGACCTC GGCGACGGCG TGACCTTCAC GCTGGAGCGT
GACCGGTGA
 
Protein sequence
MIIPVYTHGD WVAIITDGAV ALLPPSIDEA RLTQVWDALR ESADLTHSLT VLARGGLVGL 
PPFALVSVVD GHVRGFLRGD VRLLTADAHG TSEHSAAHVA TWAEINVADA GAVTVAVPAS
VAPVVDGVRM PALAAVVRAS SVEVRLRDAV AAPRPAPVVE EPAPVVALSE TTTRDGLEAD
LADGHRSTDD ENRPGAPSRR AARRALAAEH PAEPVVAPQP SPDPVRDAER AREYVARRAR
ARATAAGSPA SGYAASASGS TSTSTGVVPD AVPSPSARVP DVAPVARRAA TAQPSTSHAA
SAHPVVTRAS AAVPPPPVDT PVGEMTVVPA AEPEPLPLEL TGPDVEALLG DDDRFGSTVL
STSLVEIRRQ MSGREAGALP GPFPVPAVPR VHKIRMSSGL LVPLDRAVLI GRAPVVSRVA
ARDLPRLVTV VSPNQDISRT HAQVHTVGED VLVTDLNSTN GMLLTEVGQA PRRLRSGEPT
PITPGALVDL GDGVTFTLER DR