Gene Sked_05520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05520 
Symbol 
ID8632189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp614074 
End bp615555 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content74% 
IMG OID 
Productpredicted dehydrogenase 
Protein accessionYP_003313346 
Protein GI269793891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCCG AGAGACCCAC CACCCGCCGC CGCTACGCGA TCGTGGGGCT GGGGCACCGC 
AGCCACATGT ACGTCGACGC GATCCTCGGC GACCACGCCG ACGTCGCCGA GCTCGCCGCG
TTCTGCGAGC CCAACCCGGG CCGCGCCGCG GTCTACACCG ACCTCGCCGC CGAGCGCGGA
CGCCCCGGCG TGCCCACCTT CGCCCCGGCC GACCTCGAGC AGATGATCAC CGACGAGCGC
GTCGACACCG TCGTCGTCAC CACCCCGGAC GCGACCCACG CCGACCTCGT CGCCCGTGCC
CTGCGCGCCG GTGCGGACGT CGTCGTCGAG AAGCCGCTCA CCACGACCGC GGAGGGCTGC
CGCACCATCA CCGACGCGGT CGCCGAGACC AGCCGCTCGG TGGTCATGAC CTTCAACTAC
CGCTACGCGC CGCGCAACAG CGAGCTCCGC CGCGTCATCG CCTCCGGAGA GATCGGCGAG
GTCACCTCGG TGCACTTCGA GTGGGTCCTC GACTCCGTGC ACGGCGCCGA CTACTTCCGC
CGCTGGCACC GCCTCAAGGA CGTCTCCGGC GGGCTGCTCA TCCACAAGTC GAGCCACCAC
TTCGACCTCG TCAACTGGTG GATCGCGGAC GCCCCGACCC GTGTCTACGC CCGCGGCGGT
CTCAAGGTCT ACGGCGACAC CTCGCCCGTC GCCCAGGAGA TGGCCGAGCG CGACGCCGCG
GCCGGCCTGC CGCCCCGCCC CGTGCGTGGC ACCGGCAGCG CCGACGGGAC CCTCGGCTGG
GAGGGACGCG AGGGAGACCG CTGGTCCCTC GACCTGCGCG CCGACGAGCG GCTCCAGGCC
CTCTACCTCG ACTCCGAGCA CCACGACGGC TACGTCCGCG ACCAGGACGT GTTCTCCCCG
GGCATCACCA TCGAGGACAA CCTCGCGCTG CTCGTCGACT ACGAGCGCGG CGCGACCCTC
ACCTACTCCC TCAACGCCCA CGGCCCCTGG GAGGGGTACC GCGTGAGCGT CAACGGCACG
AGGGGTCGGG CCGAGCTCGA GGTGGTCGAG CGCGGCTCGG TCGAGCTCGA CGAGCGCGGC
CGGTCGATCC TCGACCCGAG CGCCAACCCC GGGGCGTGGG AGGGCGACGA CGTGCGTCCT
TTCGGCGACC GGCTCACCGT GCAGAAGCAC TGGGAGCGGG CCCGCGAGGT CCCCATCCCC
GAGGGCGTCG GCGGCCACGG CGGGGGAGAC GCGATCCTGC TGCAGGACGT GTTCCGCACC
CCGGTCGAGG GCCCGCGCCA CGACCCCCTC GGCCGCCCGG CCGGCTACGT CGACGGCGTC
CGCGCCGTCG CCGTCGGCAT CAGCGGCAAC GCCTCGCTGG TCAGCGGCCA GCCGGTCGAC
GTCGCCGACC TCGGCCTGGG CGTGAGCATC TCGGTGCCGT CCCCCGCAGC CCCCGACACC
ACCCCGACCT CAGCCCCCAC CACCTCTGGA GCGACCGCAT GA
 
Protein sequence
MTSERPTTRR RYAIVGLGHR SHMYVDAILG DHADVAELAA FCEPNPGRAA VYTDLAAERG 
RPGVPTFAPA DLEQMITDER VDTVVVTTPD ATHADLVARA LRAGADVVVE KPLTTTAEGC
RTITDAVAET SRSVVMTFNY RYAPRNSELR RVIASGEIGE VTSVHFEWVL DSVHGADYFR
RWHRLKDVSG GLLIHKSSHH FDLVNWWIAD APTRVYARGG LKVYGDTSPV AQEMAERDAA
AGLPPRPVRG TGSADGTLGW EGREGDRWSL DLRADERLQA LYLDSEHHDG YVRDQDVFSP
GITIEDNLAL LVDYERGATL TYSLNAHGPW EGYRVSVNGT RGRAELEVVE RGSVELDERG
RSILDPSANP GAWEGDDVRP FGDRLTVQKH WERAREVPIP EGVGGHGGGD AILLQDVFRT
PVEGPRHDPL GRPAGYVDGV RAVAVGISGN ASLVSGQPVD VADLGLGVSI SVPSPAAPDT
TPTSAPTTSG ATA