Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_05520 |
Symbol | |
ID | 8632189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 614074 |
End bp | 615555 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | predicted dehydrogenase |
Protein accession | YP_003313346 |
Protein GI | 269793891 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCCG AGAGACCCAC CACCCGCCGC CGCTACGCGA TCGTGGGGCT GGGGCACCGC AGCCACATGT ACGTCGACGC GATCCTCGGC GACCACGCCG ACGTCGCCGA GCTCGCCGCG TTCTGCGAGC CCAACCCGGG CCGCGCCGCG GTCTACACCG ACCTCGCCGC CGAGCGCGGA CGCCCCGGCG TGCCCACCTT CGCCCCGGCC GACCTCGAGC AGATGATCAC CGACGAGCGC GTCGACACCG TCGTCGTCAC CACCCCGGAC GCGACCCACG CCGACCTCGT CGCCCGTGCC CTGCGCGCCG GTGCGGACGT CGTCGTCGAG AAGCCGCTCA CCACGACCGC GGAGGGCTGC CGCACCATCA CCGACGCGGT CGCCGAGACC AGCCGCTCGG TGGTCATGAC CTTCAACTAC CGCTACGCGC CGCGCAACAG CGAGCTCCGC CGCGTCATCG CCTCCGGAGA GATCGGCGAG GTCACCTCGG TGCACTTCGA GTGGGTCCTC GACTCCGTGC ACGGCGCCGA CTACTTCCGC CGCTGGCACC GCCTCAAGGA CGTCTCCGGC GGGCTGCTCA TCCACAAGTC GAGCCACCAC TTCGACCTCG TCAACTGGTG GATCGCGGAC GCCCCGACCC GTGTCTACGC CCGCGGCGGT CTCAAGGTCT ACGGCGACAC CTCGCCCGTC GCCCAGGAGA TGGCCGAGCG CGACGCCGCG GCCGGCCTGC CGCCCCGCCC CGTGCGTGGC ACCGGCAGCG CCGACGGGAC CCTCGGCTGG GAGGGACGCG AGGGAGACCG CTGGTCCCTC GACCTGCGCG CCGACGAGCG GCTCCAGGCC CTCTACCTCG ACTCCGAGCA CCACGACGGC TACGTCCGCG ACCAGGACGT GTTCTCCCCG GGCATCACCA TCGAGGACAA CCTCGCGCTG CTCGTCGACT ACGAGCGCGG CGCGACCCTC ACCTACTCCC TCAACGCCCA CGGCCCCTGG GAGGGGTACC GCGTGAGCGT CAACGGCACG AGGGGTCGGG CCGAGCTCGA GGTGGTCGAG CGCGGCTCGG TCGAGCTCGA CGAGCGCGGC CGGTCGATCC TCGACCCGAG CGCCAACCCC GGGGCGTGGG AGGGCGACGA CGTGCGTCCT TTCGGCGACC GGCTCACCGT GCAGAAGCAC TGGGAGCGGG CCCGCGAGGT CCCCATCCCC GAGGGCGTCG GCGGCCACGG CGGGGGAGAC GCGATCCTGC TGCAGGACGT GTTCCGCACC CCGGTCGAGG GCCCGCGCCA CGACCCCCTC GGCCGCCCGG CCGGCTACGT CGACGGCGTC CGCGCCGTCG CCGTCGGCAT CAGCGGCAAC GCCTCGCTGG TCAGCGGCCA GCCGGTCGAC GTCGCCGACC TCGGCCTGGG CGTGAGCATC TCGGTGCCGT CCCCCGCAGC CCCCGACACC ACCCCGACCT CAGCCCCCAC CACCTCTGGA GCGACCGCAT GA
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Protein sequence | MTSERPTTRR RYAIVGLGHR SHMYVDAILG DHADVAELAA FCEPNPGRAA VYTDLAAERG RPGVPTFAPA DLEQMITDER VDTVVVTTPD ATHADLVARA LRAGADVVVE KPLTTTAEGC RTITDAVAET SRSVVMTFNY RYAPRNSELR RVIASGEIGE VTSVHFEWVL DSVHGADYFR RWHRLKDVSG GLLIHKSSHH FDLVNWWIAD APTRVYARGG LKVYGDTSPV AQEMAERDAA AGLPPRPVRG TGSADGTLGW EGREGDRWSL DLRADERLQA LYLDSEHHDG YVRDQDVFSP GITIEDNLAL LVDYERGATL TYSLNAHGPW EGYRVSVNGT RGRAELEVVE RGSVELDERG RSILDPSANP GAWEGDDVRP FGDRLTVQKH WERAREVPIP EGVGGHGGGD AILLQDVFRT PVEGPRHDPL GRPAGYVDGV RAVAVGISGN ASLVSGQPVD VADLGLGVSI SVPSPAAPDT TPTSAPTTSG ATA
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