Gene Sked_02730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02730 
Symbol 
ID8631911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp296447 
End bp297490 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003313076 
Protein GI269793621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.844523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CACTCGAATT CGGCATCGAC ACCTTCGGCG ACGTCACCCC CGGGCCCGAC 
GGGACGCTCA AGAGCCACGC GCAGGTGATC CGTGACGTGG TCGAAGAGGG TGTCCTCGCC
GACCAGGTGG GCCTCGACTT CATCGGTATC GGCGAGCACC ACCGCGCCGA CTACTCCATC
TCCGCGCCCG ACACCGTCCT CACCGCCATC GCCGCCAAGA CCGAGCGCAT CCGCGTCGGG
TCTGCGGTCA CCGTGCTGTC GAGCGACGAC CCCATCCGCG TGTTCCAGCG TTTCGCGACC
ATCGACGCGA TCTCGAACGG GCGTGCCGAG GTCATCCTCG GGCGCGGCTC CTTCATCGAG
TCCTTCCCGC TGTTCGGCTA CGACCTGCAG CAGTACGAGG AGCTCTTCGA GGAGAAGCTC
GACCTGTTCA TGAAGGTCCG CGAGCAGAAC CCCGTCACGT GGTCCGGCAC CACCCGCCGG
TCGCTCACGG ACCAGGAGGT GTTCCCGCAC GTCGAGAACG GCCTGCTCCC CGCCTGGATC
GCGGTCGGCG GCAGCCCGCA GAGCGTCGTG CGCGCCGCCG GCTACGGCCT GCCGCTCATG
CTCGCCATCA TCGGTGGTGA CCCGCTGGCC TTCAAGCAGT TCACCGACCT GTACCGCCGC
GCCCTCGGCG AGTTCGGCAA GCCGCTCCAG CCCGTCGGCG TCCACGCCCC CGGGTACATC
GCCGAGACCG ACGAGCAGGC GATGGAGGAC TCCTGGCCGC TCATCGGCAA GTACTTCTCC
AAGATCGCCC TCGAGCGCGG CGGCCGTGCC ATGGGCGAGG GCCAGTTCCG CGCGCAGGTC
GGCCCCGAGG GCGCGTACTT CATCGGGTCC CCCGAGACGG TCGCCAAGAA GATCGTCCGT
GTGGTCAAGG GCCTCGACCT CGACCGCTTC GACTTCAAGT ACGCCAACGG GCCGATGGAG
CACGGCAAGC TGCTCAACAG CCTCGAGCTG TACGGGACCA AGGTCGTGCC GCTGGTGCGG
GAGATGCTGC ACGACGGGGC CTAG
 
Protein sequence
MSNALEFGID TFGDVTPGPD GTLKSHAQVI RDVVEEGVLA DQVGLDFIGI GEHHRADYSI 
SAPDTVLTAI AAKTERIRVG SAVTVLSSDD PIRVFQRFAT IDAISNGRAE VILGRGSFIE
SFPLFGYDLQ QYEELFEEKL DLFMKVREQN PVTWSGTTRR SLTDQEVFPH VENGLLPAWI
AVGGSPQSVV RAAGYGLPLM LAIIGGDPLA FKQFTDLYRR ALGEFGKPLQ PVGVHAPGYI
AETDEQAMED SWPLIGKYFS KIALERGGRA MGEGQFRAQV GPEGAYFIGS PETVAKKIVR
VVKGLDLDRF DFKYANGPME HGKLLNSLEL YGTKVVPLVR EMLHDGA