| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_02050 |
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| Symbol | |
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| ID | 8631843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 214650 |
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| End bp | 215990 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003313009 |
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| Protein GI | 269793554 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.205652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCC GGGGTGCGGC AGCGGTCGCC GAGGAGGCGC GACCCGCGCG GCCTGCGCGG
AAGCCGCTGC CGGCCCGGCT GCGGCGGCAG ATCGTCATCG CGTGCTGCCT CGTGGCCAGC
GCGCAGATCA CCTGGGGTGC GATCGTCCCC GCCCTCCCCC GCTACGGCGA CATGTTCTCG
GTGTCGTCGT TCCTGCTCGG CGCGATCGTC GCGGCCTTCG GCGTCGGGCG GCTGCTCGTC
AACATCCCCG CCGGGCTGCT GGCCGACAGG TTCGGGCCGC GGCGCCTGCT GCTGGGAGCG
CTCGTCGGCC TGGTGGTCGT GACCGTGCTG ACGGCCTTCG CACCGACGCT GCCCGTGCTG
CTCGTGGCGC GGTTCTTCGC GGGGGTGCTC GGCGGGTCGG TGGTCACCAT CGGTCTGGCC
GTCGTGACCG CGCGGGCTCC CGCCGACGCC CGCGGGACGG TGCTCGCCAC GGCGCAGGCC
GTGCAGCTGG CGGGCGGGGC CATGGGGCCG GTGGTCGGCG GGCTGGTGCT GGACAGGTGG
GGGCTGCACG CCGTGTTCTT CGCGGCGGCG GTGCCGGCGG TGGCCTGCCT CGTGTGGACG
CTGCTGCAGC CCGACCAGGA GTTCTGGGGG AAGGCGGCGC CGGCTCCGGG TCTGGCTCCG
GTGGAGGCCG ACGCCGAGTT CGTGACTTCA GAGCGAGTTC GTGCCTCCCA CGTACCGAAC
TCGCTCGAAA CTCACGAACT CGACGGCTCG GCTGCCGGAG CAGGTGCGCG GCGGCGGGTC
GCGACGGACC TGGCGGCGTT CGTGGGGCTC AACGTCGTCG GCTTCGCGGT GTTCGTCATC
CGGTTCGGGG GCGAGCAGTC CCTCGTGCCG ATCCTCGGCG ACCGCGTCGG CATGAGCTCG
ACCCAGCTGG GCCTGTCGAT CGGCGTCATC ACCCTCGTCT CGCTCGGGCT GCTGCCCCTG
CTCGCGCGTC TGCTCGACGC GGGCTGGCGA CGACGGCTCC TCGTCCCCGG CATGCTCGTC
GCCGCGGTGG CGATCGCCCT GTACCCCGTG GCCGACACCC CGCTGCTCTT CGGCGCGGTC
GTCGTGACCG CCGGCGTCGG GGCAGCGGTC GGCGGCATCG TCCCCGGCGT CGTCCTCGCC
GACGTCGCCG CACCGGGCCG CCAGGGCGCC GCGATGGGCA TCTTCCGCTC GACCGGCGAC
CTCGGTGCCG TCGTCGGCCC GCTCGCCCTC GGCCTGGCCC TGGACCACTG GGGGGCGGGA
GCCGCGAGCC TCACGCTGGC CGCGGTCGCC GCGGTGTCGG CGGTCGCCTA CCTGGTGCTG
GTGCGAAGGA CGAGGCCGTA G
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| Protein sequence | MSGRGAAAVA EEARPARPAR KPLPARLRRQ IVIACCLVAS AQITWGAIVP ALPRYGDMFS
VSSFLLGAIV AAFGVGRLLV NIPAGLLADR FGPRRLLLGA LVGLVVVTVL TAFAPTLPVL
LVARFFAGVL GGSVVTIGLA VVTARAPADA RGTVLATAQA VQLAGGAMGP VVGGLVLDRW
GLHAVFFAAA VPAVACLVWT LLQPDQEFWG KAAPAPGLAP VEADAEFVTS ERVRASHVPN
SLETHELDGS AAGAGARRRV ATDLAAFVGL NVVGFAVFVI RFGGEQSLVP ILGDRVGMSS
TQLGLSIGVI TLVSLGLLPL LARLLDAGWR RRLLVPGMLV AAVAIALYPV ADTPLLFGAV
VVTAGVGAAV GGIVPGVVLA DVAAPGRQGA AMGIFRSTGD LGAVVGPLAL GLALDHWGAG
AASLTLAAVA AVSAVAYLVL VRRTRP
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