Gene Sked_01390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01390 
Symbol 
ID8631777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp143306 
End bp143752 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003312945 
Protein GI269793490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.723159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG ACCTCGCACA CCGCCTCGCC GACCAGCCGA CCTCGGCCCC GCGCACCGTC 
GGGCGCCTGG CGCTCGGAGC GTTCCTGCTC TTCGCCGGGA TCACCCACCT CACCGTCGCC
CGCGACGAGT TCCAGGCGCA GGTGCCCGCG TGGGTCCCGA TCGACGCCGA CACCGTGGTG
CTCGTGTCCG GGGTCGTCGA GATCTCCCTC GGCGGTGCCC TCCTGGTCCT GCCGCACAAG
AAGGTCCCCG TGGGCTGGGT CGTGGCGGCG TTCTTCGTCG CGATCTTCCC GGGGAACATC
TCGCAGTACG TCACGCACAC CGACGCCTTC GGCCTCGACA CCGACCAGAA GCGCGCCGTC
CGCCTCGTGT TCCAGCCGCT CCTCGTGCTC TGGGCGCTCT GGTCGACCGG CGCGTGGAGG
GCGTGGCGCC GCATGGGTCG TCGCTGA
 
Protein sequence
MPTDLAHRLA DQPTSAPRTV GRLALGAFLL FAGITHLTVA RDEFQAQVPA WVPIDADTVV 
LVSGVVEISL GGALLVLPHK KVPVGWVVAA FFVAIFPGNI SQYVTHTDAF GLDTDQKRAV
RLVFQPLLVL WALWSTGAWR AWRRMGRR