Gene Shewmr7_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3893 
Symbol 
ID4257925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4620024 
End bp4620347 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content41% 
IMG OID638124582 
ProductXRE family transcriptional regulator 
Protein accessionYP_739927 
Protein GI114049377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCTA ACCCAATACC CAATCGTCTC AAGCAAGCAA GAAAGCAAGC TGGTTATACC 
CAAATGCAAC TTGGGGTAAT GATCGGTATG GATGAAGGCT CCGCAAGTGG CAGAATGAAC
CACTATGAAA AGGGAAGACA TACACCCGAT ATAAGAACGC TAAAAAAAAT GGCTAATGCT
CTGGGTGTAC CCTTAAATTA CTTCTTCTGT GAAGACGACA TTTCCGCTGA GTTGTCAATT
CAGATAGACC GTCTCTCTCC AGAGAAAAAA CAAATGCTCT TGCAATTCAT AAATGAACTT
CAGCAAGAAA ATCATGAATT ATAA
 
Protein sequence
MEANPIPNRL KQARKQAGYT QMQLGVMIGM DEGSASGRMN HYEKGRHTPD IRTLKKMANA 
LGVPLNYFFC EDDISAELSI QIDRLSPEKK QMLLQFINEL QQENHEL