| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3843 |
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| Symbol | |
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| ID | 4256830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4563715 |
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| End bp | 4565190 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124532 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_739877 |
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| Protein GI | 114049327 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.364848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CTCAAACATT GGCTCCATCC CTATCCATTG CACAGCAAGG TATCTCGCCA
TTACATAGCG CGGCGCGCAC CTCACCCACA CAAACAGCGG TTAAGTGTAA TGGGCAGGAC
ATCAGCTACG CCCGCTTAAG CCATATGGTG CTGGGCTTGG GTGAACAGCT CACGCGCATT
GGCCTATGCC AAGGGCAACC ACTGGCGTGT ATCAGCCACA ATAATCTAGA GATGATTTGC
CTGTATTGGG CCTGCGTGGA TATTGGCGCA ATCTTCTTTC CTATCTCGCC GCGTTTTCCG
CTGGCGCAAG TTCAAGGGCT TATCGATAGC CACCACATTC CTTTTTATTG GAGCGAAGCG
GCGCTGGCCT TGTCAGGCAG TCATCAGCTC ACGCTGGATT TTAGTCTCGA TGCAGCCCCT
AGCGCCGACC TCGCCGCGAC TGCTTTTGAT ATTTATCGTC CAAGTAATGT GATTTTAACC
TCTGGCTCCA GCGGTTTTCC AAAGGCGGCC GTGCACAATC TTGCGAACCA TATTGCCAAT
GCCGAGGGCG CCCGCAGTCT TATCCCGCTG GTCACTGGTG ATGCTTGGTT GTTGTCGTTA
CCTCTGTTTC ATATTGGCGG CCTCGCCATT CTCAACCGCT GCGCCCTAGT GGCGGCGACG
GTAGTACTAC CGGATCCAAC TCTCCCGCTG CAGGCGCAAA TCGAGCGTGA CGGCTTAACC
CATGCTTCCC TCGTGCCGAC ACAGCTACTC AATCTACTCG CAGACAAACA AGCTTCACTC
AAGAGCATTA AAGCCCTGCT GCTCGGCGGC GGCGCAATTT CTATCGATTT GCTCAAACAG
CTCGAACAGC GGCATATTGC CAGCTTTACC AGCTACGGCA TGACGGAGAT GGGCTCGCAA
ATCACCACAG GCCCGGCGCT AAGCGATGGC ACCAGTGGCA AATTACTCCC AAGGCGTGAA
CTCAAAATTG TCGATGGGGT AATTTGGGTG CGAGGAGATT GCCTATTTAT GGGTTATCTC
ACGGATAAGG GGATCGAAAA ACCACTCGAT ACCGAAGGTT GGTTTTACAC TAAAGACAGG
GGCGAATGGG ATGCTAACGG CAATCTTAAG ATCTTAGGTC GCGTCGATAA TATGTTTATC
AGTGGTGGCG AAAACATTCA GCCAGAGGAG ATTGAAGCTG CGCTAAAACT GCATCCGCTA
ATTGATGAGG CGATCGTCTT TCCTCAGCCT GACGTGACCT TTGGCCAACT CCCCGCCGCC
ATTATTCGTG GTGACATTGT CCGCAGCGGA ACTGTCGGCA ACAACACAAG CCAAGAGATA
AGCGCAATAG AGGCTGAACT TGAAGTATTT CTCGCCGACA AAATCGCTCG CTTTAAACGA
CCGCGCCGTT ATTACCCTTG GCCAGAGCAT GCCGAGCAAA CGGGTTTAAA AGTGAATCGC
AAGCAACTTA TTGCCGCTAT TCAATCCGAA TCTTGA
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| Protein sequence | MSESQTLAPS LSIAQQGISP LHSAARTSPT QTAVKCNGQD ISYARLSHMV LGLGEQLTRI
GLCQGQPLAC ISHNNLEMIC LYWACVDIGA IFFPISPRFP LAQVQGLIDS HHIPFYWSEA
ALALSGSHQL TLDFSLDAAP SADLAATAFD IYRPSNVILT SGSSGFPKAA VHNLANHIAN
AEGARSLIPL VTGDAWLLSL PLFHIGGLAI LNRCALVAAT VVLPDPTLPL QAQIERDGLT
HASLVPTQLL NLLADKQASL KSIKALLLGG GAISIDLLKQ LEQRHIASFT SYGMTEMGSQ
ITTGPALSDG TSGKLLPRRE LKIVDGVIWV RGDCLFMGYL TDKGIEKPLD TEGWFYTKDR
GEWDANGNLK ILGRVDNMFI SGGENIQPEE IEAALKLHPL IDEAIVFPQP DVTFGQLPAA
IIRGDIVRSG TVGNNTSQEI SAIEAELEVF LADKIARFKR PRRYYPWPEH AEQTGLKVNR
KQLIAAIQSE S
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