| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3711 |
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| Symbol | |
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| ID | 4254851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4414119 |
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| End bp | 4415834 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638124399 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_739748 |
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| Protein GI | 114049198 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.171778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTAA TCACATTGGG GGCCTTGCTG CTCACTTGGG TGACATTCAC GGCCAAAGCG
GCAACGACCG AAATTGCATG GCTGGATAAT ACGGCCAGCC TAACTCAGTT TCGTATGGGC
TATTTTATCG ATACCTCGGA GAACATGCCC TTTACCGAAG TGATTCAACA GCCCTTTATC
GACTCGCCCA ATAGCGTATC GCTCGGCACT GCAGCCATCA AAACTTGGGC TAAAATCCCC
CTAGTAAATA CCAGTGATAA GTTACAAACC CTGTATTTGC ACCATCCTTA CGCCTATCAC
AACCGTCAAG TCGGCCTCTA CGAAATAGTC GATGGCCAAG AGACGCAGCG GCGAATACTC
GACCTCGATG ACCCTAGCAC CTATGGCTGG ATCTATGGCG GTGCAGCGGT ATTTGAGGTC
ACGCTCGCGC CGCAGCAACG TAAAACCTTA TACATTGAAA GCGTATCCTT TTCTCACCAG
TGGTTTTCAA TCGATTTATA CAACAAAGAT CAATCACAGC GGGCGCTGCT CGGGAGTTTT
ACCGATATTG CCGTTATGGT AGGCATGCTG TTAGCGCTGA TTATCTATAA CCTTTTGTTA
TTTATGTATT CCCGCCAACG GGACAATCTG TTTTACGCCT GTTACTTAAT CTCGGGCGGG
ATCTGGATTG CACTCTCCTA CGGGCTGGTC GCCGAGATAT TCGAGTTTTA CGGCTCGGCC
AGCCTCTATT GGCACCTCAC CCTGATGACC ATGCCCATCT TTTTGATTTT ATTTATGATG
GATATTTTCG AGACTCGTCA ACATTATCGG TTTGAGCATT ACGCTCTCGT GTTTGTGCTC
GCCCTGTTAG TGGCCGAGTT TTGTTATGGC GTGGTCAATA TCACTGGCGC GCTGCGTTAC
TCCAGCAGCT TAGCCGCCTT GATGATGTTA ACTACCCTCT CGGTCACCAT TTCGCTGGTG
ATAAAACGGC ATCCCATCGC TAAATATTTT CTCCTCGGCC ACAGTCTTTT CGTCGGCTTT
AGCGGCCTTG CGGTGATGTT TTACAAAGGG CGTGCCGAGT TTAATTATTT ATCCAGTCAC
GGTGTTGGCG TGGGCATTAT GCTCGAGGCG CTAGTGCTTG CCCTCATCAT CGCCTATCGC
ATTCGTCTGC TCGAAGAAAT CAAAGCCTCG CAGGAGGAAC TTAAATATCA AGCGGCGACA
GATTCGCTCA CCCAGCTATT TAATCGGGGC CATTTCCATA AAGAAGCACA GCGGGTCTAC
ACTCAGGCCA GCATCGCACA ACAGCCGATG GCGGTGATCA TCTGTGATAT CGACTTGTTC
AAACGGGTCA ACGACAAGTA TGGCCACTTG ATGGGTGACC GGGTGATTAT CGATATTGCC
ACCACTCTTA AACAGCATGC GCGTAAGTGC GATCTTGTGG CGCGTTATGG TGGTGAAGAA
TTTATTATGT TGCTGCATAA CGTGTCCCTC ACCGAGGCAC ATCTCTGTGC CGAGCGGATC
CGCTCCGCCG TCGCCGCGTT AAACTTTACG GCAGAGACGC AAGAAGTCTT TACTGTCACC
CTAAGTCTTG GAGTGGCCAC AGTTGATTTT GATCACCCCT TAGAGCACGC CATCAAACTG
GCGGACGATG CCCTGTACTG TGCTAAACAT CAGGGACGAA ACAATGTTCA ATCCAGCAAA
ATCAATAAAT TGGAAATGCA AGCAGGCATA AACTAA
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| Protein sequence | MRLITLGALL LTWVTFTAKA ATTEIAWLDN TASLTQFRMG YFIDTSENMP FTEVIQQPFI
DSPNSVSLGT AAIKTWAKIP LVNTSDKLQT LYLHHPYAYH NRQVGLYEIV DGQETQRRIL
DLDDPSTYGW IYGGAAVFEV TLAPQQRKTL YIESVSFSHQ WFSIDLYNKD QSQRALLGSF
TDIAVMVGML LALIIYNLLL FMYSRQRDNL FYACYLISGG IWIALSYGLV AEIFEFYGSA
SLYWHLTLMT MPIFLILFMM DIFETRQHYR FEHYALVFVL ALLVAEFCYG VVNITGALRY
SSSLAALMML TTLSVTISLV IKRHPIAKYF LLGHSLFVGF SGLAVMFYKG RAEFNYLSSH
GVGVGIMLEA LVLALIIAYR IRLLEEIKAS QEELKYQAAT DSLTQLFNRG HFHKEAQRVY
TQASIAQQPM AVIICDIDLF KRVNDKYGHL MGDRVIIDIA TTLKQHARKC DLVARYGGEE
FIMLLHNVSL TEAHLCAERI RSAVAALNFT AETQEVFTVT LSLGVATVDF DHPLEHAIKL
ADDALYCAKH QGRNNVQSSK INKLEMQAGI N
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