Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3108 |
Symbol | |
ID | 4257149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3687795 |
End bp | 3688439 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123792 |
Product | hypothetical protein |
Protein accession | YP_739149 |
Protein GI | 114048599 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.511175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATACG TTAACCGATT AAGTGTGATT GCTGGTTTGT TACCGCTCGC CCTCGCATTA CCAACCTATG CTGAACCTGA GCTGTTTGTC GCCCCCTACG GTGGTTACAG CTTTGGTGGT AGCTCGTTCG ATATCAATGA ACTCGATGCG AACAAGGCTG AAACCGATAA TAAGCAGAGT GTGGGTATCG AAGAGGCGAG CCATTACGGC ATCATGTTAG GGATTGGCAC TAACGATCCC GGCAATATTT ACCTGCTCTA CAGTCGCCAA TCTTCCGAGC TGAAGAGTGG CGGCCTGTTT ACCCCTGACT TAGTCGCCTC CTTAGATGTG GACTATATCC ACCTTGGCGG CACTTTATTC TTCCCCAGTG GCGATTTTCA GCCCTACATT ACCGCCAGTG CCGGGGTGAC TCGGATGATG CCCGATGATT GGTCAACGGA AACCCGTTTC TCCATGGGCA TTGGTGGTGG CGCCGAATAC CGCATGACGC AAAACTTCGC CCTGTTTGCG GATTTGCGTG GCTATGCGAC CTTTATTGAC AGTGACAGCT CACTTTTTTG TAATGAAGAC CAATGCCTAT GGCATGTAAC ATCGGATGTC ATGTGGCAAG TGCAAGCCAA TATTGGGGTC AAACTCAGTT TTTAA
|
Protein sequence | MKYVNRLSVI AGLLPLALAL PTYAEPELFV APYGGYSFGG SSFDINELDA NKAETDNKQS VGIEEASHYG IMLGIGTNDP GNIYLLYSRQ SSELKSGGLF TPDLVASLDV DYIHLGGTLF FPSGDFQPYI TASAGVTRMM PDDWSTETRF SMGIGGGAEY RMTQNFALFA DLRGYATFID SDSSLFCNED QCLWHVTSDV MWQVQANIGV KLSF
|
| |