Gene Shewmr7_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2882 
Symbol 
ID4255716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3419647 
End bp3420891 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID638123559 
Producthypothetical protein 
Protein accessionYP_738923 
Protein GI114048373 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTA TCAAACCTAT CACTCAAGCT GCCCAGGATC CTTGGGGAAA TCCCGTCGAT 
GCGACTCACA CGCCCCATCA GCCTATCCCA ACTGAACGTA ATGCCAACCT CGATGCCATA
CGTGGGCTAG CGGTATTGGG GATATTTTTT ATGAATATCT ATTTTATGGG GATAAGCTTT
TATGGCTATG CGCCCCATCA AATCCCATTG CTATCAGACC AAGTGCTCGA AGCCTTTAGC
AATTTCTTTA TTGAAGGGCG CTTTATCAGC TTGTTTTCCA TCTTATTTGG CGTTGGGCTT
TATATTCAGT ACCAACGATT TAGCGATAAA GGCTTAGCGG CCTATTCGCT GCTGCGCTCA
CGCTTGAAAT GGTTGATTGT CTTTGGCCTG ATCCACGGCA TCATTATCTG GCCCGGTGAT
ATTTTACTGA CCTATGGGAT CAGCGGCTTT TTAGCACTCT GCTATCGAGA TGCCAGCATC
GCCGAGTTAA AACGTAAGGC CAATATTTTT ATTTTCAGCT CGTTAGTGGT TATCAGCTTA
ATTAGCTTCA GTGGCAGTGA CGAACTCTTT ACCCGTGAAT CGCCCTTATT CGCCGAGCAA
TATAGCGCTT GGACAGCAAG TTACCCTAAT CAACTGTTCC TGCATGTTAT GCAGGTCGGT
TACATGGCGC TGGTCATTCC CTTCACTCTA ATGTGGTTCA CGGGTGGCCT GATGCTGCTC
GGGATGGCGC TCTATCGCCA AGGTAGCTTC GAGCGGGGGT TTGAGCGAAA CACCTTAATC
AAGCTGGTTT TAGCCAGCTT AGTGCTCTCA GCGCTGGATA CCCTGCTGGG ATTAACTCAA
AACCCGACAT TGGTGATGTT TTCGGACATC ATAGTCATGC TAAGTGCTAT CCCTACCGCA
CTGATTTACA TCCATATACT GGTTAAAATC TGCCAAAATC GCTCGGCAGT GCTAAGGCCT
TTACAAAATG TCGGCAAACT CGCCTTTAGC CTGTATATAT TGCAATCCAT TGTCGGGGTG
TTTATCTTTC GCCACTTTGC CCCAGAGTTA CTATTAACGC TCGACAGGGG CGGTTATATG
GCGATAGCGC TGGGTTACTC GCTGCTACAA TTGCTACTGG CAAGCTTGTA TTTACGCTAC
TTTCACCAAG GGCCACTCGA AAAACTCTGG CGCCAGCTCG CCTTTAAGTC CATCAACGCT
AGTAGCCATT TGAACTCGAA CAATGAACAA CAAAAGAGCC AATAA
 
Protein sequence
MPAIKPITQA AQDPWGNPVD ATHTPHQPIP TERNANLDAI RGLAVLGIFF MNIYFMGISF 
YGYAPHQIPL LSDQVLEAFS NFFIEGRFIS LFSILFGVGL YIQYQRFSDK GLAAYSLLRS
RLKWLIVFGL IHGIIIWPGD ILLTYGISGF LALCYRDASI AELKRKANIF IFSSLVVISL
ISFSGSDELF TRESPLFAEQ YSAWTASYPN QLFLHVMQVG YMALVIPFTL MWFTGGLMLL
GMALYRQGSF ERGFERNTLI KLVLASLVLS ALDTLLGLTQ NPTLVMFSDI IVMLSAIPTA
LIYIHILVKI CQNRSAVLRP LQNVGKLAFS LYILQSIVGV FIFRHFAPEL LLTLDRGGYM
AIALGYSLLQ LLLASLYLRY FHQGPLEKLW RQLAFKSINA SSHLNSNNEQ QKSQ