Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2882 |
Symbol | |
ID | 4255716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3419647 |
End bp | 3420891 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123559 |
Product | hypothetical protein |
Protein accession | YP_738923 |
Protein GI | 114048373 |
COG category | [S] Function unknown |
COG ID | [COG2311] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCTA TCAAACCTAT CACTCAAGCT GCCCAGGATC CTTGGGGAAA TCCCGTCGAT GCGACTCACA CGCCCCATCA GCCTATCCCA ACTGAACGTA ATGCCAACCT CGATGCCATA CGTGGGCTAG CGGTATTGGG GATATTTTTT ATGAATATCT ATTTTATGGG GATAAGCTTT TATGGCTATG CGCCCCATCA AATCCCATTG CTATCAGACC AAGTGCTCGA AGCCTTTAGC AATTTCTTTA TTGAAGGGCG CTTTATCAGC TTGTTTTCCA TCTTATTTGG CGTTGGGCTT TATATTCAGT ACCAACGATT TAGCGATAAA GGCTTAGCGG CCTATTCGCT GCTGCGCTCA CGCTTGAAAT GGTTGATTGT CTTTGGCCTG ATCCACGGCA TCATTATCTG GCCCGGTGAT ATTTTACTGA CCTATGGGAT CAGCGGCTTT TTAGCACTCT GCTATCGAGA TGCCAGCATC GCCGAGTTAA AACGTAAGGC CAATATTTTT ATTTTCAGCT CGTTAGTGGT TATCAGCTTA ATTAGCTTCA GTGGCAGTGA CGAACTCTTT ACCCGTGAAT CGCCCTTATT CGCCGAGCAA TATAGCGCTT GGACAGCAAG TTACCCTAAT CAACTGTTCC TGCATGTTAT GCAGGTCGGT TACATGGCGC TGGTCATTCC CTTCACTCTA ATGTGGTTCA CGGGTGGCCT GATGCTGCTC GGGATGGCGC TCTATCGCCA AGGTAGCTTC GAGCGGGGGT TTGAGCGAAA CACCTTAATC AAGCTGGTTT TAGCCAGCTT AGTGCTCTCA GCGCTGGATA CCCTGCTGGG ATTAACTCAA AACCCGACAT TGGTGATGTT TTCGGACATC ATAGTCATGC TAAGTGCTAT CCCTACCGCA CTGATTTACA TCCATATACT GGTTAAAATC TGCCAAAATC GCTCGGCAGT GCTAAGGCCT TTACAAAATG TCGGCAAACT CGCCTTTAGC CTGTATATAT TGCAATCCAT TGTCGGGGTG TTTATCTTTC GCCACTTTGC CCCAGAGTTA CTATTAACGC TCGACAGGGG CGGTTATATG GCGATAGCGC TGGGTTACTC GCTGCTACAA TTGCTACTGG CAAGCTTGTA TTTACGCTAC TTTCACCAAG GGCCACTCGA AAAACTCTGG CGCCAGCTCG CCTTTAAGTC CATCAACGCT AGTAGCCATT TGAACTCGAA CAATGAACAA CAAAAGAGCC AATAA
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Protein sequence | MPAIKPITQA AQDPWGNPVD ATHTPHQPIP TERNANLDAI RGLAVLGIFF MNIYFMGISF YGYAPHQIPL LSDQVLEAFS NFFIEGRFIS LFSILFGVGL YIQYQRFSDK GLAAYSLLRS RLKWLIVFGL IHGIIIWPGD ILLTYGISGF LALCYRDASI AELKRKANIF IFSSLVVISL ISFSGSDELF TRESPLFAEQ YSAWTASYPN QLFLHVMQVG YMALVIPFTL MWFTGGLMLL GMALYRQGSF ERGFERNTLI KLVLASLVLS ALDTLLGLTQ NPTLVMFSDI IVMLSAIPTA LIYIHILVKI CQNRSAVLRP LQNVGKLAFS LYILQSIVGV FIFRHFAPEL LLTLDRGGYM AIALGYSLLQ LLLASLYLRY FHQGPLEKLW RQLAFKSINA SSHLNSNNEQ QKSQ
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