Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2682 |
Symbol | |
ID | 4256043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3169699 |
End bp | 3170433 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123360 |
Product | hypothetical protein |
Protein accession | YP_738724 |
Protein GI | 114048174 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.566632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000043441 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTTGGG TTAAGAAAGT TGTCTCTCAG GCAATCATGC CTATTCCATT TATCCTGTTG TTATTACTGC TGTCTTTGTT GATTTGGCGC AAACCTAGGT TAGCAAAGTG GGCGATTGGC GGTGCGTTTA CGCTGCTCTT AGTGCTCAGC AGTCAATTGA GTGTCGACTA TCTCGTTAAA CCGCTCGAGA CTCAATATCC CATTAATTCC ACTCCTATTG CGGGTACCTG TGTGGTGATG GTGTTGGGCT CTGGGCATGC CGATATCCCA GGAGCTACTG CGGTACAATC TTTATCGACG GTCGCCTTAA CGCGGCTAAC GGAAGGGCTA AGGCAACTCC AATTAGGTCA AGACTGCACC TTAGTGGTCA GTGGTTGGGA GGGCGAGCTA ACGCAGCATC CCCACGCCGA AGTGATGGCC AAGGCGGCGA TTGAACTCGG TGTCGATGCA TCACGTATCG TTCAATTGCC TCTGCCGCGC GACACGATTG AAGAGGCGCA CTATTTTAAA GAACACTTTG GCAATCAAGC TGTGCGATTA GTTACCTCGG CTTCCCATAT GCCAAGGTCG ATGGCGATCT TTAGCGGTCA AGGATTAGCG GCGAGCGCCG CACCGACGGA TTTTAGGGCC AGAGACGGTT TCTACTGGCG CTTGACTGCG GATAACTTGC TCGCTTCGCA ACGGGCGATA CATGAATACA TAGGCCGTTT ATGGCTCTGG ATTAAACAGG AATAA
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Protein sequence | MFWVKKVVSQ AIMPIPFILL LLLLSLLIWR KPRLAKWAIG GAFTLLLVLS SQLSVDYLVK PLETQYPINS TPIAGTCVVM VLGSGHADIP GATAVQSLST VALTRLTEGL RQLQLGQDCT LVVSGWEGEL TQHPHAEVMA KAAIELGVDA SRIVQLPLPR DTIEEAHYFK EHFGNQAVRL VTSASHMPRS MAIFSGQGLA ASAAPTDFRA RDGFYWRLTA DNLLASQRAI HEYIGRLWLW IKQE
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