Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2681 |
Symbol | |
ID | 4256042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3168999 |
End bp | 3169694 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123359 |
Product | hypothetical protein |
Protein accession | YP_738723 |
Protein GI | 114048173 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.140782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000421056 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACGCTAG AGTCCGATGT TGTCTCGGTT CGCCCACTCT CAAAACGTAA TGGTGTAACT TTAACGATTG TGGGCGCCAG TGCCTTTGTC TTGGGCTTTG GCCTATTTGT ACTATTTCCC GAGCTATTTG CCGTGGGCTT AGTGTTTTTC AGCTTAGGTG CGATTGCGTT GATATTGGGT TTGGCAAAGG TCTATGAACC CGAGACTACC TTGAGCATGG ATGAACAGGG TCTGACCTAT TTTCATCGCC GCGGCAAAGT CGCGATAAAC TGGAACAATA TTCAACGGGT AGATATTCCA CGAGTCACTC AGGGGGTTGA TACTATTGAG CTTTCCTATA TTGGCATTAA GCTCAAACAG TTAAACCCAA TCCTAGATAA TATTTCATTA CGCCTTGCGG CGGGTTTATT GACTGAGCAG CGGCCGTTAT TGGTGACAGC AGCCTCACAG CAAGAGGATT TGGCGACCTT AGAAACTTAT CTTGGCGCCG AATTTAGCCC GCTCGTTATC GAGGGAGACC GTTACCGCGG CGTGTTGGCG ATGTTTGGTC ATCGCTGCGT GATGCTCAAT ACTCATCTTG GCTACCATCT CTATATTCCC CACGACAGCT TAGACCGTGA CCCGAGAGAA TTTATTAAGC TCTTAAGGCA ACGCATCGCG CAGAGTGTGA CTCAAATTGA TGCCACAACA CATTAA
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Protein sequence | MTLESDVVSV RPLSKRNGVT LTIVGASAFV LGFGLFVLFP ELFAVGLVFF SLGAIALILG LAKVYEPETT LSMDEQGLTY FHRRGKVAIN WNNIQRVDIP RVTQGVDTIE LSYIGIKLKQ LNPILDNISL RLAAGLLTEQ RPLLVTAASQ QEDLATLETY LGAEFSPLVI EGDRYRGVLA MFGHRCVMLN THLGYHLYIP HDSLDRDPRE FIKLLRQRIA QSVTQIDATT H
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