Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0475 |
Symbol | |
ID | 4256691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 539333 |
End bp | 539911 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638121089 |
Product | methylation site containing protein |
Protein accession | YP_736535 |
Protein GI | 114045985 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0639844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTA ATCCTCGGCT GTTTTCGATC AGTGCATCAA TAAAAGCATC CTCAAAAGCT AAGCCACAAC AGGGGTTTAC TTTAATCGAG TTAGTGGTAG GCATGTTAGT CATTGCCATT GCTATCGTGA TGCTCAGTAG CATGTTATTT CCGCAGGCGG ATCGCGCGGC CAAGACTTTA CATCGAGTCA AGAGTGCCGA GCTTGCTCAT TCGGTGATGA ATGAGATTTG GGGCAAACGT TACGATCAAA ATACTAATGC CAATGGTGGA GTGCCGGCTT GTGGGAGTCC ATTAGGGGCA CCTTGCTCAA GTGTGACCAA TTTAGGACCA TCGGAGTGGA AATGGCCTGA TGAGGGCGAG GGGCGTAACG ATTTTAACGA TGTGGATGAC TATCACGGCT TAACTCAAAA CGCCACTATG CTCAATTCCA GCAAAACTTA TGCGCAGGTG TATCCAAACT ATCAATTAAG TGTCTCTGTC GCCTATGGTT CTGCACCCAA TACCAAGTTA GTGACCATTA ATGTGACTAC TCCAGATAAC GAAGTGATCA CTTACAATCT GGTGAGGAGC AATTACTAA
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Protein sequence | MRINPRLFSI SASIKASSKA KPQQGFTLIE LVVGMLVIAI AIVMLSSMLF PQADRAAKTL HRVKSAELAH SVMNEIWGKR YDQNTNANGG VPACGSPLGA PCSSVTNLGP SEWKWPDEGE GRNDFNDVDD YHGLTQNATM LNSSKTYAQV YPNYQLSVSV AYGSAPNTKL VTINVTTPDN EVITYNLVRS NY
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