Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3918 |
Symbol | |
ID | 4254481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4679689 |
End bp | 4680591 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120566 |
Product | naphthoate synthase |
Protein accession | YP_736038 |
Protein GI | 113972245 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.315175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0248296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAC CAGTATCAGA TATTTTTGAT CCCGCACTGT GGGATGAAGT CAGCGGATTT AATTTCGACG ATATCACTTA CCATAGAGCC AAAGCCCACG GCACAGTGCG TATCGCCATC AACCGTGCAG ATTGCCTCAA TGCCTTCCGC CCAAAGACGG TCGACGAGTT GTATATCGCC CTCGATCACG CTCGCCAATG GTCCGATGTA GGTTGTGTGT TACTCACAGG CAATGGCCCC TCCGCCAAAG GACAATATTC GTTTTCCTCC GGTGGCGATC AGCGCATTCG CGGCAAAGAT GGTTATAAAT ATGAAGGCGC CGAAGAAGGC AAAGCCGATT TAGCCAGAAT GGGGCGTTTA CATATCCTCG AAGTCCAACG ATTGATCCGC TTTATGCCTA AGGTGGTGAT CGCTGTCGTG CCTGGTTGGG CGGTTGGTGG CGGCCATAGT TTACACGTTG TCTGCGACTT AACCTTAGCC TCGAAGGAAC ACGCTGTCTT CAAACAAACC GATCCCGATG TCGCGAGTTT CGATTCTGGC TATGGTAGCG CTTATCTTGC CAAGATGATT GGCCAAAAGC GCGCGCGAGA AATTTTCTTC TGTGGCTTTA ACTACAGTGC CGATGAAGCC TTTGCCATGG GAATGGTCAA TAAATCGGTT CCCCATGCCG AACTCGAAGT TGAAGCATTA AGATGGGCCA AAGAGATTAA CTCCAAATCG CCAACAGCGA TGCGTATGTT GAAGTACGGC TTTAACATGA CAGACGATGG CATGGTCGGC CAGCAACTGT TTGCGGGTGA AGCGACGCGT TTAGCCTATG CCAGTGCAGA AGCTCAAGAA GGGCGCGATG CTTTCCTCGA GAAACGCGAT CAGGACTTCT CAGCGTTTCC TTGGCATTAC TAA
|
Protein sequence | MTKPVSDIFD PALWDEVSGF NFDDITYHRA KAHGTVRIAI NRADCLNAFR PKTVDELYIA LDHARQWSDV GCVLLTGNGP SAKGQYSFSS GGDQRIRGKD GYKYEGAEEG KADLARMGRL HILEVQRLIR FMPKVVIAVV PGWAVGGGHS LHVVCDLTLA SKEHAVFKQT DPDVASFDSG YGSAYLAKMI GQKRAREIFF CGFNYSADEA FAMGMVNKSV PHAELEVEAL RWAKEINSKS PTAMRMLKYG FNMTDDGMVG QQLFAGEATR LAYASAEAQE GRDAFLEKRD QDFSAFPWHY
|
| |