Gene Shewmr4_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3682 
Symbol 
ID4254245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4398588 
End bp4400048 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content39% 
IMG OID638120324 
Producthypothetical protein 
Protein accessionYP_735802 
Protein GI113972009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACATT TACAATGCAG AAATGGCGTT TTTTATTTCC GCTACAGACT TCCCAAACAC 
CTTGCTGCTA TCGTTGGAAA GACAGAGATA AAGCATTCTC TTTTTACCAC TTCAGATGAG
ATTGCTATTG GACTTATTGC ACCTAAATTA GCACTTTTAA GGAGAATAAA GCTGATGTCG
AGTGTGCCCA ATAAACAGAT TTTAATAGAT TTATTTGCTG AACTGACAAA CTACGACTTC
GCAGACTCTT TGAAGCGACA TCAGCGAGAC GAGCAAGGGG AATATGCTAC GGCTTGGGAG
GTTGTTCGGT CTGAAATTGG TGACTCACTA GCTGATGGTG GGAATAGTTT TGACCCTAGT
GATTTTGGCA TTAAGACACC TTATCCATCA GAAATAAAAG ATAAAAGAGA TTATCAGAAA
TTATTAATGC GTTTAGCTGG TGCAATGCAT CAGCGGATTA TCAATGGAGG ACGGTTCGAA
GAAGAGCTTA GTAGTGCTAA GTCATTCTTG GGTAGGCTGT TAGATTCGAA TTATTCATCG
ACCGCTAAAG CGGTAACGCT TCCTGACACA GCGATTGCGA CAATACCTCC ATATTTGTTA
AGTGAGGCTT GGGAGGACTT TAAAAAATTT AAGTCAGATT GGAATCATGA TATTAAATTA
AATAATCAAA GGTTATACGA GATAATGCTG GCCTACTGGG GAGATATTGA TGTCAAAACC
ATAAATCGAC CAATGATAAA ATCTTTGTTA AGTCGCTATA AAGATTTCCC CAAGGGTAAC
ATTCTACCTT ATAAAAAAAT GGAAATTGCT CAGATTATGG ATATAGATGA AGAGGATATT
CCAGACGAAG ATAAAGTCAG TAGCAAGACT GTTAATGGGC TCCTTAAAGT CTGCCAAAGT
TTTTTTAGTC GCTTCCTTAC AAATGAAAAA GAGATTTACC AAATATCCCC AACAACAAAG
GTTGACTGGC CATCCAAATC TACAGGATAC GCCTGTTTCT CCGATTCCCA GATTATAAAG
CTCAAACAGG CAGCCGTTAA GTTAGAGGGT TGGCATAAAT GGACTATTCT CTTAGCCATT
TACACAGGCG CTCGACGAGG AGATATTGTT GGGTTAACAC ATGAGAGCCT GAGACTTGAC
GATGACACTG GTCGTTATTA CCTCTGGATT AATTCAGGTA AAACAGTTGC AGCCATAAGA
CCCATTCCCA TTCATAATAG ATTGATTGAA CTTGGGTTTA TAGAGTTTGT TAAGGGGGTT
GAAGGAGAGT TATTTCCAGT AGTTTTCAAT CACCACAACT CACTAACCTA TCATGCGCGG
GGGTTGATGG ATAACTTAGA TATACCTTCA GCAAATGAAA AAGGGGAGAG ATTTTCTTTG
CATAGATATT GGCAGTGTTG TTTGTGGGTG TCAATAACAT TTAAATTTGC ATTTTTAACA
GTGTTGGTTT TTATGAGATA G
 
Protein sequence
MRHLQCRNGV FYFRYRLPKH LAAIVGKTEI KHSLFTTSDE IAIGLIAPKL ALLRRIKLMS 
SVPNKQILID LFAELTNYDF ADSLKRHQRD EQGEYATAWE VVRSEIGDSL ADGGNSFDPS
DFGIKTPYPS EIKDKRDYQK LLMRLAGAMH QRIINGGRFE EELSSAKSFL GRLLDSNYSS
TAKAVTLPDT AIATIPPYLL SEAWEDFKKF KSDWNHDIKL NNQRLYEIML AYWGDIDVKT
INRPMIKSLL SRYKDFPKGN ILPYKKMEIA QIMDIDEEDI PDEDKVSSKT VNGLLKVCQS
FFSRFLTNEK EIYQISPTTK VDWPSKSTGY ACFSDSQIIK LKQAAVKLEG WHKWTILLAI
YTGARRGDIV GLTHESLRLD DDTGRYYLWI NSGKTVAAIR PIPIHNRLIE LGFIEFVKGV
EGELFPVVFN HHNSLTYHAR GLMDNLDIPS ANEKGERFSL HRYWQCCLWV SITFKFAFLT
VLVFMR