Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3682 |
Symbol | |
ID | 4254245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4398588 |
End bp | 4400048 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638120324 |
Product | hypothetical protein |
Protein accession | YP_735802 |
Protein GI | 113972009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACATT TACAATGCAG AAATGGCGTT TTTTATTTCC GCTACAGACT TCCCAAACAC CTTGCTGCTA TCGTTGGAAA GACAGAGATA AAGCATTCTC TTTTTACCAC TTCAGATGAG ATTGCTATTG GACTTATTGC ACCTAAATTA GCACTTTTAA GGAGAATAAA GCTGATGTCG AGTGTGCCCA ATAAACAGAT TTTAATAGAT TTATTTGCTG AACTGACAAA CTACGACTTC GCAGACTCTT TGAAGCGACA TCAGCGAGAC GAGCAAGGGG AATATGCTAC GGCTTGGGAG GTTGTTCGGT CTGAAATTGG TGACTCACTA GCTGATGGTG GGAATAGTTT TGACCCTAGT GATTTTGGCA TTAAGACACC TTATCCATCA GAAATAAAAG ATAAAAGAGA TTATCAGAAA TTATTAATGC GTTTAGCTGG TGCAATGCAT CAGCGGATTA TCAATGGAGG ACGGTTCGAA GAAGAGCTTA GTAGTGCTAA GTCATTCTTG GGTAGGCTGT TAGATTCGAA TTATTCATCG ACCGCTAAAG CGGTAACGCT TCCTGACACA GCGATTGCGA CAATACCTCC ATATTTGTTA AGTGAGGCTT GGGAGGACTT TAAAAAATTT AAGTCAGATT GGAATCATGA TATTAAATTA AATAATCAAA GGTTATACGA GATAATGCTG GCCTACTGGG GAGATATTGA TGTCAAAACC ATAAATCGAC CAATGATAAA ATCTTTGTTA AGTCGCTATA AAGATTTCCC CAAGGGTAAC ATTCTACCTT ATAAAAAAAT GGAAATTGCT CAGATTATGG ATATAGATGA AGAGGATATT CCAGACGAAG ATAAAGTCAG TAGCAAGACT GTTAATGGGC TCCTTAAAGT CTGCCAAAGT TTTTTTAGTC GCTTCCTTAC AAATGAAAAA GAGATTTACC AAATATCCCC AACAACAAAG GTTGACTGGC CATCCAAATC TACAGGATAC GCCTGTTTCT CCGATTCCCA GATTATAAAG CTCAAACAGG CAGCCGTTAA GTTAGAGGGT TGGCATAAAT GGACTATTCT CTTAGCCATT TACACAGGCG CTCGACGAGG AGATATTGTT GGGTTAACAC ATGAGAGCCT GAGACTTGAC GATGACACTG GTCGTTATTA CCTCTGGATT AATTCAGGTA AAACAGTTGC AGCCATAAGA CCCATTCCCA TTCATAATAG ATTGATTGAA CTTGGGTTTA TAGAGTTTGT TAAGGGGGTT GAAGGAGAGT TATTTCCAGT AGTTTTCAAT CACCACAACT CACTAACCTA TCATGCGCGG GGGTTGATGG ATAACTTAGA TATACCTTCA GCAAATGAAA AAGGGGAGAG ATTTTCTTTG CATAGATATT GGCAGTGTTG TTTGTGGGTG TCAATAACAT TTAAATTTGC ATTTTTAACA GTGTTGGTTT TTATGAGATA G
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Protein sequence | MRHLQCRNGV FYFRYRLPKH LAAIVGKTEI KHSLFTTSDE IAIGLIAPKL ALLRRIKLMS SVPNKQILID LFAELTNYDF ADSLKRHQRD EQGEYATAWE VVRSEIGDSL ADGGNSFDPS DFGIKTPYPS EIKDKRDYQK LLMRLAGAMH QRIINGGRFE EELSSAKSFL GRLLDSNYSS TAKAVTLPDT AIATIPPYLL SEAWEDFKKF KSDWNHDIKL NNQRLYEIML AYWGDIDVKT INRPMIKSLL SRYKDFPKGN ILPYKKMEIA QIMDIDEEDI PDEDKVSSKT VNGLLKVCQS FFSRFLTNEK EIYQISPTTK VDWPSKSTGY ACFSDSQIIK LKQAAVKLEG WHKWTILLAI YTGARRGDIV GLTHESLRLD DDTGRYYLWI NSGKTVAAIR PIPIHNRLIE LGFIEFVKGV EGELFPVVFN HHNSLTYHAR GLMDNLDIPS ANEKGERFSL HRYWQCCLWV SITFKFAFLT VLVFMR
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